Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC38.17■■■■□ 3.7
HFM1A2PYH4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC38.17■■■■□ 3.7
HFM1A2PYH4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC38.17■■■■□ 3.7
HFM1A2PYH4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
HFM1A2PYH4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
HFM1A2PYH4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC38.16■■■■□ 3.7
HFM1A2PYH4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC38.15■■■■□ 3.7
HFM1A2PYH4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
HFM1A2PYH4 AC008813.1-201ENST00000536597 885 ntBASIC38.14■■■■□ 3.7
HFM1A2PYH4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC38.14■■■■□ 3.7
HFM1A2PYH4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC38.13■■■■□ 3.7
HFM1A2PYH4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC38.13■■■■□ 3.7
HFM1A2PYH4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC38.12■■■■□ 3.69
HFM1A2PYH4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC38.12■■■■□ 3.69
HFM1A2PYH4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC38.12■■■■□ 3.69
HFM1A2PYH4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC38.11■■■■□ 3.69
HFM1A2PYH4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC38.11■■■■□ 3.69
HFM1A2PYH4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC38.11■■■■□ 3.69
HFM1A2PYH4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
HFM1A2PYH4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC38.1■■■■□ 3.69
HFM1A2PYH4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
HFM1A2PYH4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC38.09■■■■□ 3.69
HFM1A2PYH4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC38.09■■■■□ 3.69
HFM1A2PYH4 AC148477.6-201ENST00000623746 465 ntBASIC38.09■■■■□ 3.69
HFM1A2PYH4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC38.09■■■■□ 3.69
HFM1A2PYH4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
HFM1A2PYH4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC38.08■■■■□ 3.69
HFM1A2PYH4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC38.08■■■■□ 3.69
HFM1A2PYH4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
HFM1A2PYH4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC38.07■■■■□ 3.69
HFM1A2PYH4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
HFM1A2PYH4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC38.06■■■■□ 3.68
HFM1A2PYH4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC38.06■■■■□ 3.68
HFM1A2PYH4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC38.06■■■■□ 3.68
HFM1A2PYH4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC38.05■■■■□ 3.68
HFM1A2PYH4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
HFM1A2PYH4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
HFM1A2PYH4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
HFM1A2PYH4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
HFM1A2PYH4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
HFM1A2PYH4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC38.05■■■■□ 3.68
HFM1A2PYH4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC38.05■■■■□ 3.68
HFM1A2PYH4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC38.05■■■■□ 3.68
HFM1A2PYH4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC38.05■■■■□ 3.68
HFM1A2PYH4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC38.05■■■■□ 3.68
HFM1A2PYH4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC38.04■■■■□ 3.68
HFM1A2PYH4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC38.03■■■■□ 3.68
HFM1A2PYH4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC38.03■■■■□ 3.68
HFM1A2PYH4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
HFM1A2PYH4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
HFM1A2PYH4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC38.02■■■■□ 3.68
HFM1A2PYH4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC38.02■■■■□ 3.68
HFM1A2PYH4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
HFM1A2PYH4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC38.01■■■■□ 3.68
HFM1A2PYH4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
HFM1A2PYH4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.67
HFM1A2PYH4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC38■■■■□ 3.67
HFM1A2PYH4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC37.99■■■■□ 3.67
HFM1A2PYH4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC37.99■■■■□ 3.67
HFM1A2PYH4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC37.98■■■■□ 3.67
HFM1A2PYH4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC37.98■■■■□ 3.67
HFM1A2PYH4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC37.98■■■■□ 3.67
HFM1A2PYH4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC37.97■■■■□ 3.67
HFM1A2PYH4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
HFM1A2PYH4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
HFM1A2PYH4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
HFM1A2PYH4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC37.96■■■■□ 3.67
HFM1A2PYH4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
HFM1A2PYH4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC37.95■■■■□ 3.67
HFM1A2PYH4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC37.95■■■■□ 3.67
HFM1A2PYH4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
HFM1A2PYH4 AP002414.2-202ENST00000590929 1450 ntBASIC37.94■■■■□ 3.66
HFM1A2PYH4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC37.93■■■■□ 3.66
HFM1A2PYH4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
HFM1A2PYH4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC37.93■■■■□ 3.66
HFM1A2PYH4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC37.93■■■■□ 3.66
HFM1A2PYH4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC37.92■■■■□ 3.66
HFM1A2PYH4 MIR219A2-201ENST00000608502 1504 ntBASIC37.91■■■■□ 3.66
HFM1A2PYH4 HSD17B1P1-201ENST00000590052 955 ntBASIC37.91■■■■□ 3.66
HFM1A2PYH4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC37.91■■■■□ 3.66
HFM1A2PYH4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
HFM1A2PYH4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC37.9■■■■□ 3.66
HFM1A2PYH4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC37.89■■■■□ 3.66
HFM1A2PYH4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC37.89■■■■□ 3.66
HFM1A2PYH4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.66
HFM1A2PYH4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC37.88■■■■□ 3.65
HFM1A2PYH4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC37.88■■■■□ 3.65
HFM1A2PYH4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC37.87■■■■□ 3.65
HFM1A2PYH4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
HFM1A2PYH4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
HFM1A2PYH4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC37.86■■■■□ 3.65
HFM1A2PYH4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
HFM1A2PYH4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
HFM1A2PYH4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC37.85■■■■□ 3.65
HFM1A2PYH4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC37.85■■■■□ 3.65
HFM1A2PYH4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
HFM1A2PYH4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC37.84■■■■□ 3.65
HFM1A2PYH4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
HFM1A2PYH4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC37.82■■■■□ 3.65
HFM1A2PYH4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms