Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC145676.1-201ENST00000514988 2004 ntBASIC22.36■■□□□ 1.17
TRDV1A0A1B0GX56 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.36■■□□□ 1.17
TRDV1A0A1B0GX56 AC100797.4-201ENST00000631653 1827 ntBASIC22.36■■□□□ 1.17
TRDV1A0A1B0GX56 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRDV1A0A1B0GX56 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
TRDV1A0A1B0GX56 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRDV1A0A1B0GX56 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.35■■□□□ 1.17
TRDV1A0A1B0GX56 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRDV1A0A1B0GX56 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
TRDV1A0A1B0GX56 AC020928.2-201ENST00000588717 2197 ntBASIC22.34■■□□□ 1.17
TRDV1A0A1B0GX56 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRDV1A0A1B0GX56 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRDV1A0A1B0GX56 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.34■■□□□ 1.17
TRDV1A0A1B0GX56 AP002414.2-202ENST00000590929 1450 ntBASIC22.34■■□□□ 1.17
TRDV1A0A1B0GX56 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.33■■□□□ 1.17
TRDV1A0A1B0GX56 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRDV1A0A1B0GX56 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
TRDV1A0A1B0GX56 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRDV1A0A1B0GX56 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRDV1A0A1B0GX56 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
TRDV1A0A1B0GX56 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
TRDV1A0A1B0GX56 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRDV1A0A1B0GX56 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRDV1A0A1B0GX56 AP002365.1-201ENST00000603448 772 ntBASIC22.31■■□□□ 1.16
TRDV1A0A1B0GX56 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
TRDV1A0A1B0GX56 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
TRDV1A0A1B0GX56 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRDV1A0A1B0GX56 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.3■■□□□ 1.16
TRDV1A0A1B0GX56 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRDV1A0A1B0GX56 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRDV1A0A1B0GX56 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRDV1A0A1B0GX56 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
TRDV1A0A1B0GX56 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRDV1A0A1B0GX56 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.29■■□□□ 1.16
TRDV1A0A1B0GX56 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.29■■□□□ 1.16
TRDV1A0A1B0GX56 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRDV1A0A1B0GX56 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRDV1A0A1B0GX56 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.28■■□□□ 1.16
TRDV1A0A1B0GX56 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.28■■□□□ 1.16
TRDV1A0A1B0GX56 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRDV1A0A1B0GX56 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRDV1A0A1B0GX56 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRDV1A0A1B0GX56 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRDV1A0A1B0GX56 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.27■■□□□ 1.16
TRDV1A0A1B0GX56 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRDV1A0A1B0GX56 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRDV1A0A1B0GX56 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRDV1A0A1B0GX56 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRDV1A0A1B0GX56 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TRDV1A0A1B0GX56 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRDV1A0A1B0GX56 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.24■■□□□ 1.15
TRDV1A0A1B0GX56 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.24■■□□□ 1.15
TRDV1A0A1B0GX56 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRDV1A0A1B0GX56 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRDV1A0A1B0GX56 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
TRDV1A0A1B0GX56 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.23■■□□□ 1.15
TRDV1A0A1B0GX56 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRDV1A0A1B0GX56 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
TRDV1A0A1B0GX56 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRDV1A0A1B0GX56 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.22■■□□□ 1.15
TRDV1A0A1B0GX56 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRDV1A0A1B0GX56 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRDV1A0A1B0GX56 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRDV1A0A1B0GX56 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TRDV1A0A1B0GX56 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRDV1A0A1B0GX56 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
TRDV1A0A1B0GX56 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRDV1A0A1B0GX56 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TRDV1A0A1B0GX56 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRDV1A0A1B0GX56 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TRDV1A0A1B0GX56 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRDV1A0A1B0GX56 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRDV1A0A1B0GX56 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRDV1A0A1B0GX56 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRDV1A0A1B0GX56 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.19■■□□□ 1.14
TRDV1A0A1B0GX56 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRDV1A0A1B0GX56 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.18■■□□□ 1.14
TRDV1A0A1B0GX56 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRDV1A0A1B0GX56 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRDV1A0A1B0GX56 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRDV1A0A1B0GX56 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRDV1A0A1B0GX56 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRDV1A0A1B0GX56 AC018358.1-201ENST00000631079 1402 ntBASIC22.17■■□□□ 1.14
TRDV1A0A1B0GX56 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRDV1A0A1B0GX56 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 DUSP8P4-201ENST00000399538 1761 ntBASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TRDV1A0A1B0GX56 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms