Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB11Q9Y5F2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB11Q9Y5F2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB11Q9Y5F2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDHB11Q9Y5F2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.16■■□□□ 1.62
PCDHB11Q9Y5F2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDHB11Q9Y5F2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
PCDHB11Q9Y5F2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHB11Q9Y5F2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHB11Q9Y5F2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHB11Q9Y5F2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHB11Q9Y5F2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHB11Q9Y5F2 AC127502.1-201ENST00000399971 1502 ntBASIC25.12■■□□□ 1.61
PCDHB11Q9Y5F2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
PCDHB11Q9Y5F2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB11Q9Y5F2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB11Q9Y5F2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB11Q9Y5F2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB11Q9Y5F2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB11Q9Y5F2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB11Q9Y5F2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHB11Q9Y5F2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB11Q9Y5F2 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.09■■□□□ 1.61
PCDHB11Q9Y5F2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHB11Q9Y5F2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB11Q9Y5F2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHB11Q9Y5F2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.07■■□□□ 1.6
PCDHB11Q9Y5F2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
PCDHB11Q9Y5F2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB11Q9Y5F2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.06■■□□□ 1.6
PCDHB11Q9Y5F2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
PCDHB11Q9Y5F2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB11Q9Y5F2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PCDHB11Q9Y5F2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.04■■□□□ 1.6
PCDHB11Q9Y5F2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB11Q9Y5F2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB11Q9Y5F2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB11Q9Y5F2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB11Q9Y5F2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB11Q9Y5F2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
PCDHB11Q9Y5F2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PCDHB11Q9Y5F2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB11Q9Y5F2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB11Q9Y5F2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 DUX4L13-201ENST00000554103 1267 ntBASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 DUX4L15-201ENST00000611059 1267 ntBASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 DUX4L23-201ENST00000615195 1269 ntBASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 DUX4L24-201ENST00000617576 1269 ntBASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 DUX4L22-201ENST00000618238 1269 ntBASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 DUX4L20-201ENST00000619712 1269 ntBASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 DUX4L21-201ENST00000622058 1269 ntBASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 DUX4L10-201ENST00000622460 1267 ntBASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 DUX4L25-201ENST00000624915 1269 ntBASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB11Q9Y5F2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
PCDHB11Q9Y5F2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB11Q9Y5F2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25■■□□□ 1.59
PCDHB11Q9Y5F2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHB11Q9Y5F2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
PCDHB11Q9Y5F2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHB11Q9Y5F2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB11Q9Y5F2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDHB11Q9Y5F2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB11Q9Y5F2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHB11Q9Y5F2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.98■■□□□ 1.59
PCDHB11Q9Y5F2 LINC00273-201ENST00000539813 1452 ntBASIC24.97■■□□□ 1.59
PCDHB11Q9Y5F2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHB11Q9Y5F2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDHB11Q9Y5F2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
PCDHB11Q9Y5F2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHB11Q9Y5F2 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDHB11Q9Y5F2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.95■■□□□ 1.59
PCDHB11Q9Y5F2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHB11Q9Y5F2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.95■■□□□ 1.58
PCDHB11Q9Y5F2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHB11Q9Y5F2 AL139393.2-201ENST00000608721 2025 ntBASIC24.94■■□□□ 1.58
PCDHB11Q9Y5F2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHB11Q9Y5F2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB11Q9Y5F2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB11Q9Y5F2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.92■■□□□ 1.58
PCDHB11Q9Y5F2 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHB11Q9Y5F2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB11Q9Y5F2 AP004833.2-201ENST00000532228 1454 ntBASIC24.91■■□□□ 1.58
PCDHB11Q9Y5F2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.91■■□□□ 1.58
PCDHB11Q9Y5F2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.91■■□□□ 1.58
PCDHB11Q9Y5F2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB11Q9Y5F2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB11Q9Y5F2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.91■■□□□ 1.58
PCDHB11Q9Y5F2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.91■■□□□ 1.58
PCDHB11Q9Y5F2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PCDHB11Q9Y5F2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB11Q9Y5F2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.9■■□□□ 1.58
PCDHB11Q9Y5F2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB11Q9Y5F2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB11Q9Y5F2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.89■■□□□ 1.57
PCDHB11Q9Y5F2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHB11Q9Y5F2 AC135983.2-203ENST00000454486 1613 ntBASIC24.88■■□□□ 1.57
PCDHB11Q9Y5F2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms