Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ABCB10P3-201ENST00000561950 2166 ntBASIC22.32■■□□□ 1.16
CDH20Q9HBT6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.32■■□□□ 1.16
CDH20Q9HBT6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.32■■□□□ 1.16
CDH20Q9HBT6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDH20Q9HBT6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDH20Q9HBT6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.31■■□□□ 1.16
CDH20Q9HBT6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDH20Q9HBT6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CDH20Q9HBT6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.3■■□□□ 1.16
CDH20Q9HBT6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
CDH20Q9HBT6 AC135983.2-203ENST00000454486 1613 ntBASIC22.3■■□□□ 1.16
CDH20Q9HBT6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH20Q9HBT6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH20Q9HBT6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CDH20Q9HBT6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH20Q9HBT6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDH20Q9HBT6 LINC01971-201ENST00000617888 1048 ntBASIC22.27■■□□□ 1.16
CDH20Q9HBT6 WHAMMP2-203ENST00000563942 1603 ntBASIC22.27■■□□□ 1.16
CDH20Q9HBT6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.26■■□□□ 1.15
CDH20Q9HBT6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDH20Q9HBT6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH20Q9HBT6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH20Q9HBT6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.26■■□□□ 1.15
CDH20Q9HBT6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH20Q9HBT6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH20Q9HBT6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH20Q9HBT6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.25■■□□□ 1.15
CDH20Q9HBT6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.25■■□□□ 1.15
CDH20Q9HBT6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CDH20Q9HBT6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH20Q9HBT6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH20Q9HBT6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
CDH20Q9HBT6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CDH20Q9HBT6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH20Q9HBT6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CDH20Q9HBT6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH20Q9HBT6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH20Q9HBT6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH20Q9HBT6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.23■■□□□ 1.15
CDH20Q9HBT6 AC139426.1-201ENST00000568218 2529 ntBASIC22.23■■□□□ 1.15
CDH20Q9HBT6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.23■■□□□ 1.15
CDH20Q9HBT6 MIR7108-201ENST00000614319 87 ntBASIC22.23■■□□□ 1.15
CDH20Q9HBT6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDH20Q9HBT6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CDH20Q9HBT6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.22■■□□□ 1.15
CDH20Q9HBT6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.22■■□□□ 1.15
CDH20Q9HBT6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDH20Q9HBT6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDH20Q9HBT6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.21■■□□□ 1.15
CDH20Q9HBT6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH20Q9HBT6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH20Q9HBT6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.21■■□□□ 1.15
CDH20Q9HBT6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.21■■□□□ 1.15
CDH20Q9HBT6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.2■■□□□ 1.14
CDH20Q9HBT6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.2■■□□□ 1.14
CDH20Q9HBT6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.2■■□□□ 1.14
CDH20Q9HBT6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDH20Q9HBT6 DUX4L11-201ENST00000611504 1267 ntBASIC22.19■■□□□ 1.14
CDH20Q9HBT6 DUX4L12-201ENST00000614593 1267 ntBASIC22.19■■□□□ 1.14
CDH20Q9HBT6 DUX4L14-201ENST00000621227 1267 ntBASIC22.19■■□□□ 1.14
CDH20Q9HBT6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDH20Q9HBT6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CDH20Q9HBT6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CDH20Q9HBT6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.18■■□□□ 1.14
CDH20Q9HBT6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.17■■□□□ 1.14
CDH20Q9HBT6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.17■■□□□ 1.14
CDH20Q9HBT6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDH20Q9HBT6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDH20Q9HBT6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.16■■□□□ 1.14
CDH20Q9HBT6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.16■■□□□ 1.14
CDH20Q9HBT6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDH20Q9HBT6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDH20Q9HBT6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.16■■□□□ 1.14
CDH20Q9HBT6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDH20Q9HBT6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDH20Q9HBT6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDH20Q9HBT6 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.15■■□□□ 1.14
CDH20Q9HBT6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDH20Q9HBT6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDH20Q9HBT6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.14■■□□□ 1.13
CDH20Q9HBT6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.14■■□□□ 1.13
CDH20Q9HBT6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDH20Q9HBT6 AC100797.4-201ENST00000631653 1827 ntBASIC22.14■■□□□ 1.13
CDH20Q9HBT6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.13■■□□□ 1.13
CDH20Q9HBT6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDH20Q9HBT6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CDH20Q9HBT6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDH20Q9HBT6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDH20Q9HBT6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.13■■□□□ 1.13
CDH20Q9HBT6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
CDH20Q9HBT6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDH20Q9HBT6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDH20Q9HBT6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDH20Q9HBT6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.12■■□□□ 1.13
CDH20Q9HBT6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.12■■□□□ 1.13
CDH20Q9HBT6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CDH20Q9HBT6 DUX4L13-201ENST00000554103 1267 ntBASIC22.12■■□□□ 1.13
CDH20Q9HBT6 DUX4L15-201ENST00000611059 1267 ntBASIC22.12■■□□□ 1.13
CDH20Q9HBT6 DUX4L23-201ENST00000615195 1269 ntBASIC22.12■■□□□ 1.13
CDH20Q9HBT6 DUX4L24-201ENST00000617576 1269 ntBASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms