Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VIPAS39Q9H9C1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.48■■□□□ 1.83
VIPAS39Q9H9C1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
VIPAS39Q9H9C1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
VIPAS39Q9H9C1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VIPAS39Q9H9C1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
VIPAS39Q9H9C1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VIPAS39Q9H9C1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VIPAS39Q9H9C1 AC020928.2-201ENST00000588717 2197 ntBASIC26.45■■□□□ 1.82
VIPAS39Q9H9C1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.45■■□□□ 1.82
VIPAS39Q9H9C1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
VIPAS39Q9H9C1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
VIPAS39Q9H9C1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
VIPAS39Q9H9C1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
VIPAS39Q9H9C1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
VIPAS39Q9H9C1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.43■■□□□ 1.82
VIPAS39Q9H9C1 AP004833.2-201ENST00000532228 1454 ntBASIC26.43■■□□□ 1.82
VIPAS39Q9H9C1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VIPAS39Q9H9C1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.43■■□□□ 1.82
VIPAS39Q9H9C1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
VIPAS39Q9H9C1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VIPAS39Q9H9C1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.42■■□□□ 1.82
VIPAS39Q9H9C1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
VIPAS39Q9H9C1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.41■■□□□ 1.82
VIPAS39Q9H9C1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.41■■□□□ 1.82
VIPAS39Q9H9C1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VIPAS39Q9H9C1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.4■■□□□ 1.82
VIPAS39Q9H9C1 AC010864.1-201ENST00000609407 1511 ntBASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
VIPAS39Q9H9C1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
VIPAS39Q9H9C1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
VIPAS39Q9H9C1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.39■■□□□ 1.81
VIPAS39Q9H9C1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
VIPAS39Q9H9C1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.38■■□□□ 1.81
VIPAS39Q9H9C1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VIPAS39Q9H9C1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VIPAS39Q9H9C1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
VIPAS39Q9H9C1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
VIPAS39Q9H9C1 AC145676.1-201ENST00000514988 2004 ntBASIC26.36■■□□□ 1.81
VIPAS39Q9H9C1 AC093323.1-202ENST00000635031 2045 ntBASIC26.36■■□□□ 1.81
VIPAS39Q9H9C1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
VIPAS39Q9H9C1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
VIPAS39Q9H9C1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VIPAS39Q9H9C1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
VIPAS39Q9H9C1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
VIPAS39Q9H9C1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
VIPAS39Q9H9C1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.34■■□□□ 1.81
VIPAS39Q9H9C1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VIPAS39Q9H9C1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.32■■□□□ 1.8
VIPAS39Q9H9C1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VIPAS39Q9H9C1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VIPAS39Q9H9C1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VIPAS39Q9H9C1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VIPAS39Q9H9C1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
VIPAS39Q9H9C1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VIPAS39Q9H9C1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VIPAS39Q9H9C1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
VIPAS39Q9H9C1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.28■■□□□ 1.8
VIPAS39Q9H9C1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.28■■□□□ 1.8
VIPAS39Q9H9C1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VIPAS39Q9H9C1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.27■■□□□ 1.8
VIPAS39Q9H9C1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
VIPAS39Q9H9C1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.25■■□□□ 1.79
VIPAS39Q9H9C1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
VIPAS39Q9H9C1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VIPAS39Q9H9C1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
VIPAS39Q9H9C1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VIPAS39Q9H9C1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
VIPAS39Q9H9C1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.23■■□□□ 1.79
VIPAS39Q9H9C1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VIPAS39Q9H9C1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.22■■□□□ 1.79
VIPAS39Q9H9C1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
VIPAS39Q9H9C1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
VIPAS39Q9H9C1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.21■■□□□ 1.79
VIPAS39Q9H9C1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VIPAS39Q9H9C1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VIPAS39Q9H9C1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.21■■□□□ 1.79
VIPAS39Q9H9C1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
VIPAS39Q9H9C1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
VIPAS39Q9H9C1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms