Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VIPAS39Q9H9C1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.48■■□□□ 1.83
VIPAS39Q9H9C1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
VIPAS39Q9H9C1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
VIPAS39Q9H9C1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VIPAS39Q9H9C1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
VIPAS39Q9H9C1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VIPAS39Q9H9C1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VIPAS39Q9H9C1 AC020928.2-201ENST00000588717 2197 ntBASIC26.45■■□□□ 1.82
VIPAS39Q9H9C1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.45■■□□□ 1.82
VIPAS39Q9H9C1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
VIPAS39Q9H9C1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
VIPAS39Q9H9C1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
VIPAS39Q9H9C1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
VIPAS39Q9H9C1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
VIPAS39Q9H9C1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.43■■□□□ 1.82
VIPAS39Q9H9C1 AP004833.2-201ENST00000532228 1454 ntBASIC26.43■■□□□ 1.82
VIPAS39Q9H9C1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VIPAS39Q9H9C1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.43■■□□□ 1.82
VIPAS39Q9H9C1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
VIPAS39Q9H9C1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VIPAS39Q9H9C1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.42■■□□□ 1.82
VIPAS39Q9H9C1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
VIPAS39Q9H9C1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.41■■□□□ 1.82
VIPAS39Q9H9C1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.41■■□□□ 1.82
VIPAS39Q9H9C1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VIPAS39Q9H9C1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.4■■□□□ 1.82
VIPAS39Q9H9C1 AC010864.1-201ENST00000609407 1511 ntBASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.39■■□□□ 1.82
VIPAS39Q9H9C1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
VIPAS39Q9H9C1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
VIPAS39Q9H9C1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
VIPAS39Q9H9C1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.39■■□□□ 1.81
VIPAS39Q9H9C1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
VIPAS39Q9H9C1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.38■■□□□ 1.81
VIPAS39Q9H9C1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VIPAS39Q9H9C1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VIPAS39Q9H9C1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
VIPAS39Q9H9C1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
VIPAS39Q9H9C1 AC145676.1-201ENST00000514988 2004 ntBASIC26.36■■□□□ 1.81
VIPAS39Q9H9C1 AC093323.1-202ENST00000635031 2045 ntBASIC26.36■■□□□ 1.81
VIPAS39Q9H9C1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
VIPAS39Q9H9C1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
VIPAS39Q9H9C1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VIPAS39Q9H9C1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
VIPAS39Q9H9C1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
VIPAS39Q9H9C1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
VIPAS39Q9H9C1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.34■■□□□ 1.81
VIPAS39Q9H9C1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
VIPAS39Q9H9C1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VIPAS39Q9H9C1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.32■■□□□ 1.8
VIPAS39Q9H9C1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VIPAS39Q9H9C1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VIPAS39Q9H9C1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
VIPAS39Q9H9C1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VIPAS39Q9H9C1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VIPAS39Q9H9C1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
VIPAS39Q9H9C1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VIPAS39Q9H9C1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VIPAS39Q9H9C1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
VIPAS39Q9H9C1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.28■■□□□ 1.8
VIPAS39Q9H9C1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.28■■□□□ 1.8
VIPAS39Q9H9C1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VIPAS39Q9H9C1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.27■■□□□ 1.8
VIPAS39Q9H9C1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
VIPAS39Q9H9C1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.25■■□□□ 1.79
VIPAS39Q9H9C1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
VIPAS39Q9H9C1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VIPAS39Q9H9C1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
VIPAS39Q9H9C1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VIPAS39Q9H9C1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
VIPAS39Q9H9C1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.23■■□□□ 1.79
VIPAS39Q9H9C1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VIPAS39Q9H9C1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.22■■□□□ 1.79
VIPAS39Q9H9C1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
VIPAS39Q9H9C1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
VIPAS39Q9H9C1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.21■■□□□ 1.79
VIPAS39Q9H9C1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VIPAS39Q9H9C1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VIPAS39Q9H9C1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.21■■□□□ 1.79
VIPAS39Q9H9C1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
VIPAS39Q9H9C1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
VIPAS39Q9H9C1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms