Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCNX3Q9H6A9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCNX3Q9H6A9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCNX3Q9H6A9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCNX3Q9H6A9 AC100797.4-201ENST00000631653 1827 ntBASIC23.44■■□□□ 1.34
PCNX3Q9H6A9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCNX3Q9H6A9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.43■■□□□ 1.34
PCNX3Q9H6A9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCNX3Q9H6A9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCNX3Q9H6A9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCNX3Q9H6A9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.42■■□□□ 1.34
PCNX3Q9H6A9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.42■■□□□ 1.34
PCNX3Q9H6A9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
PCNX3Q9H6A9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCNX3Q9H6A9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.4■■□□□ 1.34
PCNX3Q9H6A9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCNX3Q9H6A9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.4■■□□□ 1.34
PCNX3Q9H6A9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCNX3Q9H6A9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
PCNX3Q9H6A9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.34
PCNX3Q9H6A9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.39■■□□□ 1.33
PCNX3Q9H6A9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCNX3Q9H6A9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCNX3Q9H6A9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCNX3Q9H6A9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCNX3Q9H6A9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
PCNX3Q9H6A9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCNX3Q9H6A9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCNX3Q9H6A9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCNX3Q9H6A9 DRD5P2-201ENST00000421395 2012 ntBASIC23.37■■□□□ 1.33
PCNX3Q9H6A9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
PCNX3Q9H6A9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCNX3Q9H6A9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.37■■□□□ 1.33
PCNX3Q9H6A9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCNX3Q9H6A9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.37■■□□□ 1.33
PCNX3Q9H6A9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.37■■□□□ 1.33
PCNX3Q9H6A9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCNX3Q9H6A9 MIR7108-201ENST00000614319 87 ntBASIC23.36■■□□□ 1.33
PCNX3Q9H6A9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
PCNX3Q9H6A9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PCNX3Q9H6A9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.35■■□□□ 1.33
PCNX3Q9H6A9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.35■■□□□ 1.33
PCNX3Q9H6A9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.35■■□□□ 1.33
PCNX3Q9H6A9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCNX3Q9H6A9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.34■■□□□ 1.33
PCNX3Q9H6A9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.34■■□□□ 1.33
PCNX3Q9H6A9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCNX3Q9H6A9 ZNRF2P2-203ENST00000454624 420 ntBASIC23.33■■□□□ 1.33
PCNX3Q9H6A9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.33■■□□□ 1.33
PCNX3Q9H6A9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCNX3Q9H6A9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCNX3Q9H6A9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PCNX3Q9H6A9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PCNX3Q9H6A9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.32
PCNX3Q9H6A9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PCNX3Q9H6A9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCNX3Q9H6A9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
PCNX3Q9H6A9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.32■■□□□ 1.32
PCNX3Q9H6A9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.32■■□□□ 1.32
PCNX3Q9H6A9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCNX3Q9H6A9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCNX3Q9H6A9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCNX3Q9H6A9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCNX3Q9H6A9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.3■■□□□ 1.32
PCNX3Q9H6A9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.3■■□□□ 1.32
PCNX3Q9H6A9 CR559946.2-201ENST00000623684 991 ntBASIC23.29■■□□□ 1.32
PCNX3Q9H6A9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.29■■□□□ 1.32
PCNX3Q9H6A9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.29■■□□□ 1.32
PCNX3Q9H6A9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCNX3Q9H6A9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.28■■□□□ 1.32
PCNX3Q9H6A9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCNX3Q9H6A9 AP004833.2-201ENST00000532228 1454 ntBASIC23.28■■□□□ 1.32
PCNX3Q9H6A9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCNX3Q9H6A9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.27■■□□□ 1.32
PCNX3Q9H6A9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.27■■□□□ 1.32
PCNX3Q9H6A9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.27■■□□□ 1.32
PCNX3Q9H6A9 MIR3648-2-201ENST00000581792 180 ntBASIC23.27■■□□□ 1.32
PCNX3Q9H6A9 MIR3648-1-201ENST00000615959 180 ntBASIC23.27■■□□□ 1.32
PCNX3Q9H6A9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.27■■□□□ 1.32
PCNX3Q9H6A9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCNX3Q9H6A9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCNX3Q9H6A9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCNX3Q9H6A9 LINC01971-201ENST00000617888 1048 ntBASIC23.26■■□□□ 1.31
PCNX3Q9H6A9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCNX3Q9H6A9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCNX3Q9H6A9 HLA-V-202ENST00000446817 847 ntBASIC23.26■■□□□ 1.31
PCNX3Q9H6A9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCNX3Q9H6A9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 DUX4L13-201ENST00000554103 1267 ntBASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 DUX4L15-201ENST00000611059 1267 ntBASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 DUX4L23-201ENST00000615195 1269 ntBASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 DUX4L24-201ENST00000617576 1269 ntBASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 DUX4L22-201ENST00000618238 1269 ntBASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 DUX4L20-201ENST00000619712 1269 ntBASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 DUX4L21-201ENST00000622058 1269 ntBASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 DUX4L10-201ENST00000622460 1267 ntBASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 DUX4L25-201ENST00000624915 1269 ntBASIC23.25■■□□□ 1.31
PCNX3Q9H6A9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms