Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CYSTM1Q9H1C7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CYSTM1Q9H1C7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CYSTM1Q9H1C7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CYSTM1Q9H1C7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CYSTM1Q9H1C7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CYSTM1Q9H1C7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CYSTM1Q9H1C7 AC079834.2-201ENST00000609776 1949 ntBASIC15.38■□□□□ 0.05
CYSTM1Q9H1C7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
CYSTM1Q9H1C7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.37■□□□□ 0.05
CYSTM1Q9H1C7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CYSTM1Q9H1C7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CYSTM1Q9H1C7 AC012676.1-201ENST00000574705 1949 ntBASIC15.37■□□□□ 0.05
CYSTM1Q9H1C7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CYSTM1Q9H1C7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CYSTM1Q9H1C7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CYSTM1Q9H1C7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CYSTM1Q9H1C7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CYSTM1Q9H1C7 ST7-AS1-201ENST00000456775 1889 ntBASIC15.36■□□□□ 0.05
CYSTM1Q9H1C7 AL024507.2-201ENST00000606070 2574 ntBASIC15.36■□□□□ 0.05
CYSTM1Q9H1C7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CYSTM1Q9H1C7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CYSTM1Q9H1C7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CYSTM1Q9H1C7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CYSTM1Q9H1C7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CYSTM1Q9H1C7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CYSTM1Q9H1C7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CYSTM1Q9H1C7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CYSTM1Q9H1C7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CYSTM1Q9H1C7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CYSTM1Q9H1C7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CYSTM1Q9H1C7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CYSTM1Q9H1C7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYSTM1Q9H1C7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYSTM1Q9H1C7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC15.32■□□□□ 0.04
CYSTM1Q9H1C7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CYSTM1Q9H1C7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYSTM1Q9H1C7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC15.32■□□□□ 0.04
CYSTM1Q9H1C7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYSTM1Q9H1C7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYSTM1Q9H1C7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYSTM1Q9H1C7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYSTM1Q9H1C7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYSTM1Q9H1C7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYSTM1Q9H1C7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYSTM1Q9H1C7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC15.31■□□□□ 0.04
CYSTM1Q9H1C7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CYSTM1Q9H1C7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYSTM1Q9H1C7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CYSTM1Q9H1C7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC15.29■□□□□ 0.04
CYSTM1Q9H1C7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CYSTM1Q9H1C7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC15.29■□□□□ 0.04
CYSTM1Q9H1C7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC15.29■□□□□ 0.04
CYSTM1Q9H1C7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CYSTM1Q9H1C7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.29■□□□□ 0.04
CYSTM1Q9H1C7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC15.29■□□□□ 0.04
CYSTM1Q9H1C7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CYSTM1Q9H1C7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CYSTM1Q9H1C7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CYSTM1Q9H1C7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CYSTM1Q9H1C7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CYSTM1Q9H1C7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CYSTM1Q9H1C7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CYSTM1Q9H1C7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CYSTM1Q9H1C7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CYSTM1Q9H1C7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CYSTM1Q9H1C7 DRD5P2-201ENST00000421395 2012 ntBASIC15.27■□□□□ 0.04
CYSTM1Q9H1C7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CYSTM1Q9H1C7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CYSTM1Q9H1C7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CYSTM1Q9H1C7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC15.27■□□□□ 0.04
CYSTM1Q9H1C7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CYSTM1Q9H1C7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CYSTM1Q9H1C7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CYSTM1Q9H1C7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CYSTM1Q9H1C7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CYSTM1Q9H1C7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC15.27■□□□□ 0.03
CYSTM1Q9H1C7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CYSTM1Q9H1C7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC15.26■□□□□ 0.03
CYSTM1Q9H1C7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CYSTM1Q9H1C7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC15.26■□□□□ 0.03
CYSTM1Q9H1C7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC15.26■□□□□ 0.03
CYSTM1Q9H1C7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CYSTM1Q9H1C7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CYSTM1Q9H1C7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CYSTM1Q9H1C7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CYSTM1Q9H1C7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC15.24■□□□□ 0.03
CYSTM1Q9H1C7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CYSTM1Q9H1C7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CYSTM1Q9H1C7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CYSTM1Q9H1C7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.23■□□□□ 0.03
CYSTM1Q9H1C7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CYSTM1Q9H1C7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CYSTM1Q9H1C7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CYSTM1Q9H1C7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CYSTM1Q9H1C7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CYSTM1Q9H1C7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CYSTM1Q9H1C7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYSTM1Q9H1C7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CYSTM1Q9H1C7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms