Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCGB3A1Q96QR1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCGB3A1Q96QR1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCGB3A1Q96QR1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCGB3A1Q96QR1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.23■□□□□ 0.51
SCGB3A1Q96QR1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SCGB3A1Q96QR1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCGB3A1Q96QR1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCGB3A1Q96QR1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCGB3A1Q96QR1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
SCGB3A1Q96QR1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SCGB3A1Q96QR1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCGB3A1Q96QR1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.22■□□□□ 0.51
SCGB3A1Q96QR1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SCGB3A1Q96QR1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.22■□□□□ 0.51
SCGB3A1Q96QR1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SCGB3A1Q96QR1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
SCGB3A1Q96QR1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCGB3A1Q96QR1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCGB3A1Q96QR1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.21■□□□□ 0.51
SCGB3A1Q96QR1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCGB3A1Q96QR1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.2■□□□□ 0.5
SCGB3A1Q96QR1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCGB3A1Q96QR1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCGB3A1Q96QR1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCGB3A1Q96QR1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCGB3A1Q96QR1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.2■□□□□ 0.5
SCGB3A1Q96QR1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.19■□□□□ 0.5
SCGB3A1Q96QR1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SCGB3A1Q96QR1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCGB3A1Q96QR1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.19■□□□□ 0.5
SCGB3A1Q96QR1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCGB3A1Q96QR1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCGB3A1Q96QR1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.19■□□□□ 0.5
SCGB3A1Q96QR1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCGB3A1Q96QR1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCGB3A1Q96QR1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCGB3A1Q96QR1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCGB3A1Q96QR1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
SCGB3A1Q96QR1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCGB3A1Q96QR1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SCGB3A1Q96QR1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.18■□□□□ 0.5
SCGB3A1Q96QR1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
SCGB3A1Q96QR1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.18■□□□□ 0.5
SCGB3A1Q96QR1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCGB3A1Q96QR1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCGB3A1Q96QR1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.17■□□□□ 0.5
SCGB3A1Q96QR1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.17■□□□□ 0.5
SCGB3A1Q96QR1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCGB3A1Q96QR1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCGB3A1Q96QR1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.17■□□□□ 0.5
SCGB3A1Q96QR1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCGB3A1Q96QR1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SCGB3A1Q96QR1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.16■□□□□ 0.5
SCGB3A1Q96QR1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCGB3A1Q96QR1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
SCGB3A1Q96QR1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCGB3A1Q96QR1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCGB3A1Q96QR1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCGB3A1Q96QR1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCGB3A1Q96QR1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCGB3A1Q96QR1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SCGB3A1Q96QR1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.14■□□□□ 0.49
SCGB3A1Q96QR1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCGB3A1Q96QR1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCGB3A1Q96QR1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCGB3A1Q96QR1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SCGB3A1Q96QR1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.13■□□□□ 0.49
SCGB3A1Q96QR1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCGB3A1Q96QR1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCGB3A1Q96QR1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCGB3A1Q96QR1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCGB3A1Q96QR1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCGB3A1Q96QR1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCGB3A1Q96QR1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCGB3A1Q96QR1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCGB3A1Q96QR1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCGB3A1Q96QR1 LINC01003-201ENST00000564834 1764 ntBASIC18.11■□□□□ 0.49
SCGB3A1Q96QR1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.11■□□□□ 0.49
SCGB3A1Q96QR1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCGB3A1Q96QR1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCGB3A1Q96QR1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCGB3A1Q96QR1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCGB3A1Q96QR1 AC010864.1-201ENST00000609407 1511 ntBASIC18.1■□□□□ 0.49
SCGB3A1Q96QR1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCGB3A1Q96QR1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCGB3A1Q96QR1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCGB3A1Q96QR1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCGB3A1Q96QR1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SCGB3A1Q96QR1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCGB3A1Q96QR1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCGB3A1Q96QR1 AC006077.2-201ENST00000623591 457 ntBASIC18.07■□□□□ 0.48
SCGB3A1Q96QR1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCGB3A1Q96QR1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCGB3A1Q96QR1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCGB3A1Q96QR1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCGB3A1Q96QR1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.07■□□□□ 0.48
SCGB3A1Q96QR1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCGB3A1Q96QR1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCGB3A1Q96QR1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms