Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 AL121749.1-202ENST00000609313 2153 ntBASIC25.59■■□□□ 1.69
NAF1Q96HR8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NAF1Q96HR8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
NAF1Q96HR8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NAF1Q96HR8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NAF1Q96HR8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NAF1Q96HR8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NAF1Q96HR8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NAF1Q96HR8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NAF1Q96HR8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NAF1Q96HR8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NAF1Q96HR8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.55■■□□□ 1.68
NAF1Q96HR8 MIR6090-201ENST00000622481 60 ntBASIC25.55■■□□□ 1.68
NAF1Q96HR8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NAF1Q96HR8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NAF1Q96HR8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.54■■□□□ 1.68
NAF1Q96HR8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NAF1Q96HR8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NAF1Q96HR8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
NAF1Q96HR8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.53■■□□□ 1.68
NAF1Q96HR8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
NAF1Q96HR8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.52■■□□□ 1.68
NAF1Q96HR8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.52■■□□□ 1.68
NAF1Q96HR8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.52■■□□□ 1.68
NAF1Q96HR8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.52■■□□□ 1.68
NAF1Q96HR8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
NAF1Q96HR8 AC108673.1-201ENST00000510422 1159 ntBASIC25.51■■□□□ 1.67
NAF1Q96HR8 DUX4L11-201ENST00000611504 1267 ntBASIC25.51■■□□□ 1.67
NAF1Q96HR8 DUX4L12-201ENST00000614593 1267 ntBASIC25.51■■□□□ 1.67
NAF1Q96HR8 DUX4L14-201ENST00000621227 1267 ntBASIC25.51■■□□□ 1.67
NAF1Q96HR8 ST7-AS1-201ENST00000456775 1889 ntBASIC25.51■■□□□ 1.67
NAF1Q96HR8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NAF1Q96HR8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
NAF1Q96HR8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NAF1Q96HR8 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.5■■□□□ 1.67
NAF1Q96HR8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NAF1Q96HR8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.5■■□□□ 1.67
NAF1Q96HR8 CR559946.2-201ENST00000623684 991 ntBASIC25.5■■□□□ 1.67
NAF1Q96HR8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NAF1Q96HR8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NAF1Q96HR8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NAF1Q96HR8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
NAF1Q96HR8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
NAF1Q96HR8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NAF1Q96HR8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.48■■□□□ 1.67
NAF1Q96HR8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
NAF1Q96HR8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
NAF1Q96HR8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.47■■□□□ 1.67
NAF1Q96HR8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NAF1Q96HR8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NAF1Q96HR8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
NAF1Q96HR8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.46■■□□□ 1.67
NAF1Q96HR8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
NAF1Q96HR8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
NAF1Q96HR8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
NAF1Q96HR8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
NAF1Q96HR8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.45■■□□□ 1.66
NAF1Q96HR8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.45■■□□□ 1.66
NAF1Q96HR8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NAF1Q96HR8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
NAF1Q96HR8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
NAF1Q96HR8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.44■■□□□ 1.66
NAF1Q96HR8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.43■■□□□ 1.66
NAF1Q96HR8 LINC01971-201ENST00000617888 1048 ntBASIC25.43■■□□□ 1.66
NAF1Q96HR8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NAF1Q96HR8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.43■■□□□ 1.66
NAF1Q96HR8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
NAF1Q96HR8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
NAF1Q96HR8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
NAF1Q96HR8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
NAF1Q96HR8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.41■■□□□ 1.66
NAF1Q96HR8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.4■■□□□ 1.66
NAF1Q96HR8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NAF1Q96HR8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
NAF1Q96HR8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NAF1Q96HR8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.39■■□□□ 1.66
NAF1Q96HR8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.39■■□□□ 1.66
NAF1Q96HR8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
NAF1Q96HR8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NAF1Q96HR8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
NAF1Q96HR8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
NAF1Q96HR8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NAF1Q96HR8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
NAF1Q96HR8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
NAF1Q96HR8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.38■■□□□ 1.65
NAF1Q96HR8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NAF1Q96HR8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.38■■□□□ 1.65
NAF1Q96HR8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NAF1Q96HR8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NAF1Q96HR8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NAF1Q96HR8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NAF1Q96HR8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
NAF1Q96HR8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.36■■□□□ 1.65
NAF1Q96HR8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NAF1Q96HR8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
NAF1Q96HR8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NAF1Q96HR8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.36■■□□□ 1.65
NAF1Q96HR8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NAF1Q96HR8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NAF1Q96HR8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms