Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDND2Q8NHS1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.72■■□□□ 1.07
CLDND2Q8NHS1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDND2Q8NHS1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.71■■□□□ 1.07
CLDND2Q8NHS1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDND2Q8NHS1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.71■■□□□ 1.07
CLDND2Q8NHS1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDND2Q8NHS1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDND2Q8NHS1 LINC00273-201ENST00000539813 1452 ntBASIC21.71■■□□□ 1.07
CLDND2Q8NHS1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDND2Q8NHS1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDND2Q8NHS1 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.7■■□□□ 1.06
CLDND2Q8NHS1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.7■■□□□ 1.06
CLDND2Q8NHS1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CLDND2Q8NHS1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDND2Q8NHS1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDND2Q8NHS1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDND2Q8NHS1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDND2Q8NHS1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.68■■□□□ 1.06
CLDND2Q8NHS1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.68■■□□□ 1.06
CLDND2Q8NHS1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDND2Q8NHS1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDND2Q8NHS1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDND2Q8NHS1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.66■■□□□ 1.06
CLDND2Q8NHS1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.66■■□□□ 1.06
CLDND2Q8NHS1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDND2Q8NHS1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDND2Q8NHS1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDND2Q8NHS1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CLDND2Q8NHS1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDND2Q8NHS1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDND2Q8NHS1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDND2Q8NHS1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.64■■□□□ 1.05
CLDND2Q8NHS1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDND2Q8NHS1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDND2Q8NHS1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDND2Q8NHS1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDND2Q8NHS1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLDND2Q8NHS1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDND2Q8NHS1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDND2Q8NHS1 AC127502.1-201ENST00000399971 1502 ntBASIC21.61■■□□□ 1.05
CLDND2Q8NHS1 AL135925.1-201ENST00000605920 1701 ntBASIC21.61■■□□□ 1.05
CLDND2Q8NHS1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
CLDND2Q8NHS1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDND2Q8NHS1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDND2Q8NHS1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDND2Q8NHS1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDND2Q8NHS1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.59■■□□□ 1.05
CLDND2Q8NHS1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CLDND2Q8NHS1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CLDND2Q8NHS1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CLDND2Q8NHS1 HSD17B1P1-201ENST00000590052 955 ntBASIC21.58■■□□□ 1.05
CLDND2Q8NHS1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLDND2Q8NHS1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDND2Q8NHS1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.57■■□□□ 1.04
CLDND2Q8NHS1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CLDND2Q8NHS1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLDND2Q8NHS1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDND2Q8NHS1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDND2Q8NHS1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.56■■□□□ 1.04
CLDND2Q8NHS1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLDND2Q8NHS1 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.55■■□□□ 1.04
CLDND2Q8NHS1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.55■■□□□ 1.04
CLDND2Q8NHS1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDND2Q8NHS1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDND2Q8NHS1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDND2Q8NHS1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CLDND2Q8NHS1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDND2Q8NHS1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.53■■□□□ 1.04
CLDND2Q8NHS1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CLDND2Q8NHS1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDND2Q8NHS1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLDND2Q8NHS1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLDND2Q8NHS1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CLDND2Q8NHS1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CLDND2Q8NHS1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDND2Q8NHS1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDND2Q8NHS1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.51■■□□□ 1.03
CLDND2Q8NHS1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 AC135983.2-203ENST00000454486 1613 ntBASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 WHAMMP2-203ENST00000563942 1603 ntBASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDND2Q8NHS1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CLDND2Q8NHS1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDND2Q8NHS1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.49■■□□□ 1.03
CLDND2Q8NHS1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDND2Q8NHS1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.48■■□□□ 1.03
CLDND2Q8NHS1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.48■■□□□ 1.03
CLDND2Q8NHS1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms