Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TMEM116Q8NCL8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM116Q8NCL8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TMEM116Q8NCL8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM116Q8NCL8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
TMEM116Q8NCL8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM116Q8NCL8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM116Q8NCL8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM116Q8NCL8 MIR762-201ENST00000390236 83 ntBASIC20.13■□□□□ 0.81
TMEM116Q8NCL8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM116Q8NCL8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM116Q8NCL8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM116Q8NCL8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM116Q8NCL8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
TMEM116Q8NCL8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.12■□□□□ 0.81
TMEM116Q8NCL8 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.12■□□□□ 0.81
TMEM116Q8NCL8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM116Q8NCL8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM116Q8NCL8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM116Q8NCL8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM116Q8NCL8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM116Q8NCL8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM116Q8NCL8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM116Q8NCL8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM116Q8NCL8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM116Q8NCL8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TMEM116Q8NCL8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM116Q8NCL8 BX255925.1-201ENST00000566954 1854 ntBASIC20.1■□□□□ 0.81
TMEM116Q8NCL8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.1■□□□□ 0.81
TMEM116Q8NCL8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM116Q8NCL8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM116Q8NCL8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TMEM116Q8NCL8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM116Q8NCL8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM116Q8NCL8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM116Q8NCL8 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.09■□□□□ 0.81
TMEM116Q8NCL8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM116Q8NCL8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM116Q8NCL8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM116Q8NCL8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM116Q8NCL8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM116Q8NCL8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM116Q8NCL8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM116Q8NCL8 AL121749.1-202ENST00000609313 2153 ntBASIC20.07■□□□□ 0.8
TMEM116Q8NCL8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM116Q8NCL8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
TMEM116Q8NCL8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM116Q8NCL8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.06■□□□□ 0.8
TMEM116Q8NCL8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM116Q8NCL8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM116Q8NCL8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM116Q8NCL8 AC005559.1-201ENST00000589661 871 ntBASIC20.05■□□□□ 0.8
TMEM116Q8NCL8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM116Q8NCL8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM116Q8NCL8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM116Q8NCL8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM116Q8NCL8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TMEM116Q8NCL8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.04■□□□□ 0.8
TMEM116Q8NCL8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM116Q8NCL8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM116Q8NCL8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM116Q8NCL8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.02■□□□□ 0.8
TMEM116Q8NCL8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM116Q8NCL8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.02■□□□□ 0.8
TMEM116Q8NCL8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM116Q8NCL8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM116Q8NCL8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM116Q8NCL8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
TMEM116Q8NCL8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TMEM116Q8NCL8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM116Q8NCL8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM116Q8NCL8 AC100797.4-201ENST00000631653 1827 ntBASIC20.01■□□□□ 0.79
TMEM116Q8NCL8 LINC01003-201ENST00000564834 1764 ntBASIC20■□□□□ 0.79
TMEM116Q8NCL8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM116Q8NCL8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM116Q8NCL8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.99■□□□□ 0.79
TMEM116Q8NCL8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TMEM116Q8NCL8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TMEM116Q8NCL8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM116Q8NCL8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM116Q8NCL8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TMEM116Q8NCL8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TMEM116Q8NCL8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TMEM116Q8NCL8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM116Q8NCL8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
TMEM116Q8NCL8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM116Q8NCL8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM116Q8NCL8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM116Q8NCL8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM116Q8NCL8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM116Q8NCL8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM116Q8NCL8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM116Q8NCL8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TMEM116Q8NCL8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM116Q8NCL8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM116Q8NCL8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
TMEM116Q8NCL8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM116Q8NCL8 MIR3665-201ENST00000578708 105 ntBASIC19.96■□□□□ 0.79
TMEM116Q8NCL8 AP006261.1-201ENST00000584783 668 ntBASIC19.96■□□□□ 0.79
TMEM116Q8NCL8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms