Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC36.67■■■■□ 3.46
XRN1Q8IZH2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
XRN1Q8IZH2 AC135983.2-203ENST00000454486 1613 ntBASIC36.66■■■■□ 3.46
XRN1Q8IZH2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC36.66■■■■□ 3.46
XRN1Q8IZH2 AC148477.6-201ENST00000623746 465 ntBASIC36.66■■■■□ 3.46
XRN1Q8IZH2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC36.65■■■■□ 3.46
XRN1Q8IZH2 GFER-205ENST00000569451 517 ntTSL 5 BASIC36.65■■■■□ 3.46
XRN1Q8IZH2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
XRN1Q8IZH2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
XRN1Q8IZH2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC36.64■■■■□ 3.46
XRN1Q8IZH2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC36.64■■■■□ 3.46
XRN1Q8IZH2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC36.62■■■■□ 3.45
XRN1Q8IZH2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
XRN1Q8IZH2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
XRN1Q8IZH2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC36.62■■■■□ 3.45
XRN1Q8IZH2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC36.62■■■■□ 3.45
XRN1Q8IZH2 U85056.1-201ENST00000616429 682 ntBASIC36.62■■■■□ 3.45
XRN1Q8IZH2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
XRN1Q8IZH2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC36.6■■■■□ 3.45
XRN1Q8IZH2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC36.6■■■■□ 3.45
XRN1Q8IZH2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC36.59■■■■□ 3.45
XRN1Q8IZH2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC36.59■■■■□ 3.45
XRN1Q8IZH2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC36.59■■■■□ 3.45
XRN1Q8IZH2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
XRN1Q8IZH2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
XRN1Q8IZH2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
XRN1Q8IZH2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC36.59■■■■□ 3.45
XRN1Q8IZH2 AL033527.3-201ENST00000566366 1196 ntBASIC36.59■■■■□ 3.45
XRN1Q8IZH2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC36.58■■■■□ 3.45
XRN1Q8IZH2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC36.56■■■■□ 3.44
XRN1Q8IZH2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC36.56■■■■□ 3.44
XRN1Q8IZH2 AC092296.2-201ENST00000589470 999 ntBASIC36.56■■■■□ 3.44
XRN1Q8IZH2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC36.54■■■■□ 3.44
XRN1Q8IZH2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
XRN1Q8IZH2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
XRN1Q8IZH2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC36.53■■■■□ 3.44
XRN1Q8IZH2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
XRN1Q8IZH2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
XRN1Q8IZH2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
XRN1Q8IZH2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC36.51■■■■□ 3.44
XRN1Q8IZH2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC36.51■■■■□ 3.43
XRN1Q8IZH2 KRT18P60-201ENST00000312876 1297 ntBASIC36.51■■■■□ 3.43
XRN1Q8IZH2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC36.5■■■■□ 3.43
XRN1Q8IZH2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC36.5■■■■□ 3.43
XRN1Q8IZH2 AC127502.1-201ENST00000399971 1502 ntBASIC36.49■■■■□ 3.43
XRN1Q8IZH2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC36.48■■■■□ 3.43
XRN1Q8IZH2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC36.48■■■■□ 3.43
XRN1Q8IZH2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC36.48■■■■□ 3.43
XRN1Q8IZH2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
XRN1Q8IZH2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC36.47■■■■□ 3.43
XRN1Q8IZH2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC36.46■■■■□ 3.43
XRN1Q8IZH2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC36.46■■■■□ 3.43
XRN1Q8IZH2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC36.45■■■■□ 3.43
XRN1Q8IZH2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
XRN1Q8IZH2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC36.42■■■■□ 3.42
XRN1Q8IZH2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
XRN1Q8IZH2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC36.42■■■■□ 3.42
XRN1Q8IZH2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
XRN1Q8IZH2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
XRN1Q8IZH2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC36.41■■■■□ 3.42
XRN1Q8IZH2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC36.4■■■■□ 3.42
XRN1Q8IZH2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC36.4■■■■□ 3.42
XRN1Q8IZH2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC36.4■■■■□ 3.42
XRN1Q8IZH2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC36.39■■■■□ 3.42
XRN1Q8IZH2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
XRN1Q8IZH2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
XRN1Q8IZH2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC36.39■■■■□ 3.42
XRN1Q8IZH2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
XRN1Q8IZH2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC36.37■■■■□ 3.41
XRN1Q8IZH2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC36.37■■■■□ 3.41
XRN1Q8IZH2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC36.37■■■■□ 3.41
XRN1Q8IZH2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC36.37■■■■□ 3.41
XRN1Q8IZH2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC36.36■■■■□ 3.41
XRN1Q8IZH2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC36.36■■■■□ 3.41
XRN1Q8IZH2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
XRN1Q8IZH2 AC110285.7-201ENST00000624417 1536 ntBASIC36.35■■■■□ 3.41
XRN1Q8IZH2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
XRN1Q8IZH2 TSPY13P-201ENST00000338964 914 ntBASIC36.34■■■■□ 3.41
XRN1Q8IZH2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
XRN1Q8IZH2 AL157400.5-201ENST00000507624 621 ntBASIC36.34■■■■□ 3.41
XRN1Q8IZH2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
XRN1Q8IZH2 MIR219A2-201ENST00000608502 1504 ntBASIC36.32■■■■□ 3.41
XRN1Q8IZH2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
XRN1Q8IZH2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC36.32■■■■□ 3.4
XRN1Q8IZH2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC36.32■■■■□ 3.4
XRN1Q8IZH2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC36.32■■■■□ 3.4
XRN1Q8IZH2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
XRN1Q8IZH2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC36.32■■■■□ 3.4
XRN1Q8IZH2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC36.31■■■■□ 3.4
XRN1Q8IZH2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
XRN1Q8IZH2 AC004987.1-201ENST00000428627 508 ntBASIC36.3■■■■□ 3.4
XRN1Q8IZH2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
XRN1Q8IZH2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
XRN1Q8IZH2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC36.28■■■■□ 3.4
XRN1Q8IZH2 RARRES2P1-201ENST00000474487 481 ntBASIC36.28■■■■□ 3.4
XRN1Q8IZH2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC36.27■■■■□ 3.4
XRN1Q8IZH2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
XRN1Q8IZH2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
XRN1Q8IZH2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC36.26■■■■□ 3.4
XRN1Q8IZH2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms