Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
FOXR1Q6PIV2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
FOXR1Q6PIV2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.48■■□□□ 1.83
FOXR1Q6PIV2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.48■■□□□ 1.83
FOXR1Q6PIV2 AC087741.3-201ENST00000624270 1347 ntBASIC26.47■■□□□ 1.83
FOXR1Q6PIV2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
FOXR1Q6PIV2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
FOXR1Q6PIV2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.46■■□□□ 1.83
FOXR1Q6PIV2 MIR762-201ENST00000390236 83 ntBASIC26.46■■□□□ 1.83
FOXR1Q6PIV2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.46■■□□□ 1.83
FOXR1Q6PIV2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
FOXR1Q6PIV2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
FOXR1Q6PIV2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
FOXR1Q6PIV2 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.45■■□□□ 1.82
FOXR1Q6PIV2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
FOXR1Q6PIV2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
FOXR1Q6PIV2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.44■■□□□ 1.82
FOXR1Q6PIV2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
FOXR1Q6PIV2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
FOXR1Q6PIV2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
FOXR1Q6PIV2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.44■■□□□ 1.82
FOXR1Q6PIV2 AC005559.1-201ENST00000589661 871 ntBASIC26.43■■□□□ 1.82
FOXR1Q6PIV2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.43■■□□□ 1.82
FOXR1Q6PIV2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
FOXR1Q6PIV2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.43■■□□□ 1.82
FOXR1Q6PIV2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
FOXR1Q6PIV2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
FOXR1Q6PIV2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
FOXR1Q6PIV2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.41■■□□□ 1.82
FOXR1Q6PIV2 AC044849.2-201ENST00000606596 710 ntBASIC26.41■■□□□ 1.82
FOXR1Q6PIV2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.41■■□□□ 1.82
FOXR1Q6PIV2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
FOXR1Q6PIV2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
FOXR1Q6PIV2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
FOXR1Q6PIV2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
FOXR1Q6PIV2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.39■■□□□ 1.82
FOXR1Q6PIV2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.39■■□□□ 1.82
FOXR1Q6PIV2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
FOXR1Q6PIV2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.38■■□□□ 1.81
FOXR1Q6PIV2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXR1Q6PIV2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXR1Q6PIV2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXR1Q6PIV2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
FOXR1Q6PIV2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
FOXR1Q6PIV2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.36■■□□□ 1.81
FOXR1Q6PIV2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.36■■□□□ 1.81
FOXR1Q6PIV2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.36■■□□□ 1.81
FOXR1Q6PIV2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
FOXR1Q6PIV2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.35■■□□□ 1.81
FOXR1Q6PIV2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
FOXR1Q6PIV2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
FOXR1Q6PIV2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.34■■□□□ 1.81
FOXR1Q6PIV2 AL139393.2-201ENST00000608721 2025 ntBASIC26.34■■□□□ 1.81
FOXR1Q6PIV2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
FOXR1Q6PIV2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
FOXR1Q6PIV2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
FOXR1Q6PIV2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
FOXR1Q6PIV2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
FOXR1Q6PIV2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
FOXR1Q6PIV2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
FOXR1Q6PIV2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
FOXR1Q6PIV2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.32■■□□□ 1.8
FOXR1Q6PIV2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
FOXR1Q6PIV2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
FOXR1Q6PIV2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
FOXR1Q6PIV2 AL135925.1-201ENST00000605920 1701 ntBASIC26.31■■□□□ 1.8
FOXR1Q6PIV2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
FOXR1Q6PIV2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FOXR1Q6PIV2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FOXR1Q6PIV2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
FOXR1Q6PIV2 HLA-V-202ENST00000446817 847 ntBASIC26.29■■□□□ 1.8
FOXR1Q6PIV2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FOXR1Q6PIV2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FOXR1Q6PIV2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
FOXR1Q6PIV2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
FOXR1Q6PIV2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.28■■□□□ 1.8
FOXR1Q6PIV2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.28■■□□□ 1.8
FOXR1Q6PIV2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.27■■□□□ 1.8
FOXR1Q6PIV2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FOXR1Q6PIV2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.26■■□□□ 1.79
FOXR1Q6PIV2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.26■■□□□ 1.79
FOXR1Q6PIV2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
FOXR1Q6PIV2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
FOXR1Q6PIV2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
FOXR1Q6PIV2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.23■■□□□ 1.79
FOXR1Q6PIV2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
FOXR1Q6PIV2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
FOXR1Q6PIV2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
FOXR1Q6PIV2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
FOXR1Q6PIV2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.22■■□□□ 1.79
FOXR1Q6PIV2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.22■■□□□ 1.79
FOXR1Q6PIV2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.22■■□□□ 1.79
FOXR1Q6PIV2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
FOXR1Q6PIV2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.21■■□□□ 1.79
FOXR1Q6PIV2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.21■■□□□ 1.79
FOXR1Q6PIV2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
FOXR1Q6PIV2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
FOXR1Q6PIV2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
FOXR1Q6PIV2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
FOXR1Q6PIV2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms