Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.3■■□□□ 1.16
TBC1D28Q2M2D7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 WHAMMP2-203ENST00000563942 1603 ntBASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 LINC01971-201ENST00000617888 1048 ntBASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 AC139426.1-201ENST00000568218 2529 ntBASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TBC1D28Q2M2D7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.26■■□□□ 1.15
TBC1D28Q2M2D7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
TBC1D28Q2M2D7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.26■■□□□ 1.15
TBC1D28Q2M2D7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.26■■□□□ 1.15
TBC1D28Q2M2D7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D28Q2M2D7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.25■■□□□ 1.15
TBC1D28Q2M2D7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.25■■□□□ 1.15
TBC1D28Q2M2D7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
TBC1D28Q2M2D7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D28Q2M2D7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.24■■□□□ 1.15
TBC1D28Q2M2D7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.24■■□□□ 1.15
TBC1D28Q2M2D7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D28Q2M2D7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D28Q2M2D7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D28Q2M2D7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.23■■□□□ 1.15
TBC1D28Q2M2D7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D28Q2M2D7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.23■■□□□ 1.15
TBC1D28Q2M2D7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D28Q2M2D7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.21■■□□□ 1.15
TBC1D28Q2M2D7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D28Q2M2D7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TBC1D28Q2M2D7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D28Q2M2D7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TBC1D28Q2M2D7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.19■■□□□ 1.14
TBC1D28Q2M2D7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TBC1D28Q2M2D7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
TBC1D28Q2M2D7 DUX4L11-201ENST00000611504 1267 ntBASIC22.18■■□□□ 1.14
TBC1D28Q2M2D7 DUX4L12-201ENST00000614593 1267 ntBASIC22.18■■□□□ 1.14
TBC1D28Q2M2D7 DUX4L14-201ENST00000621227 1267 ntBASIC22.18■■□□□ 1.14
TBC1D28Q2M2D7 AC100797.4-201ENST00000631653 1827 ntBASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 MIR7108-201ENST00000614319 87 ntBASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TBC1D28Q2M2D7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TBC1D28Q2M2D7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TBC1D28Q2M2D7 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.14■■□□□ 1.13
TBC1D28Q2M2D7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TBC1D28Q2M2D7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.14■■□□□ 1.13
TBC1D28Q2M2D7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L13-201ENST00000554103 1267 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L15-201ENST00000611059 1267 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L23-201ENST00000615195 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L24-201ENST00000617576 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L22-201ENST00000618238 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L20-201ENST00000619712 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L21-201ENST00000622058 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L10-201ENST00000622460 1267 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L25-201ENST00000624915 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.12■■□□□ 1.13
TBC1D28Q2M2D7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
TBC1D28Q2M2D7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D28Q2M2D7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.12■■□□□ 1.13
TBC1D28Q2M2D7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.12■■□□□ 1.13
TBC1D28Q2M2D7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms