Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
COL5A2P05997 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC34.73■■■■□ 3.15
COL5A2P05997 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.73■■■■□ 3.15
COL5A2P05997 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
COL5A2P05997 WHAMMP2-203ENST00000563942 1603 ntBASIC34.72■■■■□ 3.15
COL5A2P05997 AC135983.2-203ENST00000454486 1613 ntBASIC34.71■■■■□ 3.15
COL5A2P05997 AC018358.1-201ENST00000631079 1402 ntBASIC34.71■■■■□ 3.15
COL5A2P05997 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
COL5A2P05997 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC34.71■■■■□ 3.15
COL5A2P05997 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
COL5A2P05997 AC060814.1-201ENST00000554326 538 ntBASIC34.71■■■■□ 3.15
COL5A2P05997 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
COL5A2P05997 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
COL5A2P05997 CHST11-203ENST00000547956 936 ntTSL 2 BASIC34.69■■■■□ 3.14
COL5A2P05997 U85056.1-201ENST00000616429 682 ntBASIC34.69■■■■□ 3.14
COL5A2P05997 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
COL5A2P05997 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC34.68■■■■□ 3.14
COL5A2P05997 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC34.68■■■■□ 3.14
COL5A2P05997 AL033527.3-201ENST00000566366 1196 ntBASIC34.68■■■■□ 3.14
COL5A2P05997 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC34.68■■■■□ 3.14
COL5A2P05997 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC34.67■■■■□ 3.14
COL5A2P05997 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC34.67■■■■□ 3.14
COL5A2P05997 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC34.67■■■■□ 3.14
COL5A2P05997 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC34.66■■■■□ 3.14
COL5A2P05997 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
COL5A2P05997 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC34.65■■■■□ 3.14
COL5A2P05997 AC148477.6-201ENST00000623746 465 ntBASIC34.65■■■■□ 3.14
COL5A2P05997 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC34.64■■■■□ 3.14
COL5A2P05997 HYI-213ENST00000583037 1322 ntTSL 5 BASIC34.64■■■■□ 3.14
COL5A2P05997 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC34.64■■■■□ 3.14
COL5A2P05997 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC34.63■■■■□ 3.13
COL5A2P05997 AC127502.1-201ENST00000399971 1502 ntBASIC34.63■■■■□ 3.13
COL5A2P05997 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC34.63■■■■□ 3.13
COL5A2P05997 GFER-205ENST00000569451 517 ntTSL 5 BASIC34.62■■■■□ 3.13
COL5A2P05997 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC34.61■■■■□ 3.13
COL5A2P05997 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
COL5A2P05997 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC34.61■■■■□ 3.13
COL5A2P05997 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC34.61■■■■□ 3.13
COL5A2P05997 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
COL5A2P05997 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC34.61■■■■□ 3.13
COL5A2P05997 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
COL5A2P05997 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC34.58■■■■□ 3.13
COL5A2P05997 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
COL5A2P05997 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
COL5A2P05997 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
COL5A2P05997 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
COL5A2P05997 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC34.58■■■■□ 3.13
COL5A2P05997 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC34.58■■■■□ 3.13
COL5A2P05997 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
COL5A2P05997 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC34.57■■■■□ 3.12
COL5A2P05997 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC34.57■■■■□ 3.12
COL5A2P05997 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC34.56■■■■□ 3.12
COL5A2P05997 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC34.56■■■■□ 3.12
COL5A2P05997 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC34.54■■■■□ 3.12
COL5A2P05997 AC092296.2-201ENST00000589470 999 ntBASIC34.54■■■■□ 3.12
COL5A2P05997 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
COL5A2P05997 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC34.53■■■■□ 3.12
COL5A2P05997 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
COL5A2P05997 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
COL5A2P05997 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC34.52■■■■□ 3.12
COL5A2P05997 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
COL5A2P05997 KRT18P60-201ENST00000312876 1297 ntBASIC34.52■■■■□ 3.12
COL5A2P05997 AC110285.7-201ENST00000624417 1536 ntBASIC34.51■■■■□ 3.11
COL5A2P05997 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
COL5A2P05997 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC34.48■■■■□ 3.11
COL5A2P05997 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC34.46■■■■□ 3.11
COL5A2P05997 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
COL5A2P05997 TSPY13P-201ENST00000338964 914 ntBASIC34.46■■■■□ 3.11
COL5A2P05997 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
COL5A2P05997 RPS2-210ENST00000530225 765 ntTSL 2 BASIC34.46■■■■□ 3.11
COL5A2P05997 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC34.46■■■■□ 3.11
COL5A2P05997 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC34.45■■■■□ 3.1
COL5A2P05997 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
COL5A2P05997 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
COL5A2P05997 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC34.43■■■■□ 3.1
COL5A2P05997 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
COL5A2P05997 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
COL5A2P05997 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
COL5A2P05997 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC34.42■■■■□ 3.1
COL5A2P05997 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC34.42■■■■□ 3.1
COL5A2P05997 MIR219A2-201ENST00000608502 1504 ntBASIC34.42■■■■□ 3.1
COL5A2P05997 AC004987.1-201ENST00000428627 508 ntBASIC34.42■■■■□ 3.1
COL5A2P05997 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1
COL5A2P05997 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
COL5A2P05997 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC34.41■■■■□ 3.1
COL5A2P05997 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
COL5A2P05997 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC34.39■■■■□ 3.1
COL5A2P05997 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
COL5A2P05997 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC34.39■■■■□ 3.1
COL5A2P05997 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
COL5A2P05997 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
COL5A2P05997 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
COL5A2P05997 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
COL5A2P05997 ATP5G2P3-201ENST00000429083 425 ntBASIC34.39■■■■□ 3.1
COL5A2P05997 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC34.39■■■■□ 3.1
COL5A2P05997 PEX7-203ENST00000541292 945 ntTSL 5 BASIC34.38■■■■□ 3.09
COL5A2P05997 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC34.38■■■■□ 3.09
COL5A2P05997 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC34.37■■■■□ 3.09
COL5A2P05997 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC34.36■■■■□ 3.09
COL5A2P05997 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms