Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.56■■□□□ 1.68
SOD1P00441 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SOD1P00441 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SOD1P00441 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SOD1P00441 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SOD1P00441 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.55■■□□□ 1.68
SOD1P00441 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.55■■□□□ 1.68
SOD1P00441 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.55■■□□□ 1.68
SOD1P00441 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SOD1P00441 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.54■■□□□ 1.68
SOD1P00441 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.54■■□□□ 1.68
SOD1P00441 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.54■■□□□ 1.68
SOD1P00441 AC016575.1-201ENST00000607026 382 ntBASIC25.54■■□□□ 1.68
SOD1P00441 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SOD1P00441 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SOD1P00441 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SOD1P00441 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SOD1P00441 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
SOD1P00441 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SOD1P00441 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SOD1P00441 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SOD1P00441 AL139393.2-201ENST00000608721 2025 ntBASIC25.53■■□□□ 1.68
SOD1P00441 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SOD1P00441 HLA-V-202ENST00000446817 847 ntBASIC25.52■■□□□ 1.68
SOD1P00441 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SOD1P00441 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SOD1P00441 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.51■■□□□ 1.67
SOD1P00441 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.51■■□□□ 1.67
SOD1P00441 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
SOD1P00441 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SOD1P00441 AP004833.2-201ENST00000532228 1454 ntBASIC25.49■■□□□ 1.67
SOD1P00441 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SOD1P00441 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.49■■□□□ 1.67
SOD1P00441 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SOD1P00441 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SOD1P00441 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SOD1P00441 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.46■■□□□ 1.67
SOD1P00441 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SOD1P00441 MIR639-201ENST00000384974 98 ntBASIC25.46■■□□□ 1.67
SOD1P00441 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.45■■□□□ 1.66
SOD1P00441 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SOD1P00441 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SOD1P00441 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.44■■□□□ 1.66
SOD1P00441 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.44■■□□□ 1.66
SOD1P00441 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SOD1P00441 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SOD1P00441 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.44■■□□□ 1.66
SOD1P00441 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SOD1P00441 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
SOD1P00441 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.43■■□□□ 1.66
SOD1P00441 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
SOD1P00441 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SOD1P00441 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SOD1P00441 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SOD1P00441 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.42■■□□□ 1.66
SOD1P00441 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.41■■□□□ 1.66
SOD1P00441 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SOD1P00441 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SOD1P00441 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
SOD1P00441 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SOD1P00441 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.4■■□□□ 1.66
SOD1P00441 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SOD1P00441 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SOD1P00441 AC100797.4-201ENST00000631653 1827 ntBASIC25.38■■□□□ 1.65
SOD1P00441 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.38■■□□□ 1.65
SOD1P00441 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.37■■□□□ 1.65
SOD1P00441 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SOD1P00441 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.37■■□□□ 1.65
SOD1P00441 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.37■■□□□ 1.65
SOD1P00441 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SOD1P00441 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
SOD1P00441 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.36■■□□□ 1.65
SOD1P00441 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SOD1P00441 MIR4449-201ENST00000578365 66 ntBASIC25.36■■□□□ 1.65
SOD1P00441 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SOD1P00441 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SOD1P00441 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SOD1P00441 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SOD1P00441 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.35■■□□□ 1.65
SOD1P00441 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.35■■□□□ 1.65
SOD1P00441 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SOD1P00441 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.35■■□□□ 1.65
SOD1P00441 AC110285.7-201ENST00000624417 1536 ntBASIC25.35■■□□□ 1.65
SOD1P00441 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SOD1P00441 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SOD1P00441 ABCB10P3-201ENST00000561950 2166 ntBASIC25.34■■□□□ 1.65
SOD1P00441 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SOD1P00441 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SOD1P00441 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SOD1P00441 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
SOD1P00441 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
SOD1P00441 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.32■■□□□ 1.64
SOD1P00441 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SOD1P00441 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SOD1P00441 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.31■■□□□ 1.64
SOD1P00441 AC139426.1-201ENST00000568218 2529 ntBASIC25.31■■□□□ 1.64
SOD1P00441 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
SOD1P00441 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SOD1P00441 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SOD1P00441 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms