Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.12■■□□□ 1.29
PPP1R3DO95685 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPP1R3DO95685 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
PPP1R3DO95685 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP1R3DO95685 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP1R3DO95685 AL121749.1-202ENST00000609313 2153 ntBASIC23.11■■□□□ 1.29
PPP1R3DO95685 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP1R3DO95685 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.1■■□□□ 1.29
PPP1R3DO95685 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP1R3DO95685 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
PPP1R3DO95685 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP1R3DO95685 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PPP1R3DO95685 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.09■■□□□ 1.29
PPP1R3DO95685 BX255925.1-201ENST00000566954 1854 ntBASIC23.09■■□□□ 1.29
PPP1R3DO95685 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP1R3DO95685 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP1R3DO95685 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP1R3DO95685 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.07■■□□□ 1.28
PPP1R3DO95685 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP1R3DO95685 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.07■■□□□ 1.28
PPP1R3DO95685 AC100797.4-201ENST00000631653 1827 ntBASIC23.07■■□□□ 1.28
PPP1R3DO95685 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP1R3DO95685 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.06■■□□□ 1.28
PPP1R3DO95685 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPP1R3DO95685 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPP1R3DO95685 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPP1R3DO95685 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.04■■□□□ 1.28
PPP1R3DO95685 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.04■■□□□ 1.28
PPP1R3DO95685 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPP1R3DO95685 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.03■■□□□ 1.28
PPP1R3DO95685 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.03■■□□□ 1.28
PPP1R3DO95685 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PPP1R3DO95685 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PPP1R3DO95685 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PPP1R3DO95685 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PPP1R3DO95685 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PPP1R3DO95685 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PPP1R3DO95685 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPP1R3DO95685 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
PPP1R3DO95685 SUZ12P1-203ENST00000578195 985 ntBASIC23.01■■□□□ 1.27
PPP1R3DO95685 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.01■■□□□ 1.27
PPP1R3DO95685 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PPP1R3DO95685 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPP1R3DO95685 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PPP1R3DO95685 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPP1R3DO95685 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23■■□□□ 1.27
PPP1R3DO95685 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PPP1R3DO95685 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPP1R3DO95685 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23■■□□□ 1.27
PPP1R3DO95685 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23■■□□□ 1.27
PPP1R3DO95685 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPP1R3DO95685 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPP1R3DO95685 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPP1R3DO95685 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
PPP1R3DO95685 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PPP1R3DO95685 AC005559.1-201ENST00000589661 871 ntBASIC22.99■■□□□ 1.27
PPP1R3DO95685 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PPP1R3DO95685 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP1R3DO95685 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.98■■□□□ 1.27
PPP1R3DO95685 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PPP1R3DO95685 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP1R3DO95685 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PPP1R3DO95685 LINC01003-201ENST00000564834 1764 ntBASIC22.98■■□□□ 1.27
PPP1R3DO95685 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPP1R3DO95685 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PPP1R3DO95685 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PPP1R3DO95685 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.97■■□□□ 1.27
PPP1R3DO95685 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.97■■□□□ 1.27
PPP1R3DO95685 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PPP1R3DO95685 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PPP1R3DO95685 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
PPP1R3DO95685 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PPP1R3DO95685 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PPP1R3DO95685 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PPP1R3DO95685 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PPP1R3DO95685 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.95■■□□□ 1.26
PPP1R3DO95685 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
PPP1R3DO95685 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PPP1R3DO95685 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PPP1R3DO95685 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PPP1R3DO95685 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PPP1R3DO95685 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PPP1R3DO95685 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.93■■□□□ 1.26
PPP1R3DO95685 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.93■■□□□ 1.26
PPP1R3DO95685 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PPP1R3DO95685 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
PPP1R3DO95685 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.92■■□□□ 1.26
PPP1R3DO95685 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.92■■□□□ 1.26
PPP1R3DO95685 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PPP1R3DO95685 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.92■■□□□ 1.26
PPP1R3DO95685 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP1R3DO95685 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP1R3DO95685 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.91■■□□□ 1.26
PPP1R3DO95685 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.91■■□□□ 1.26
PPP1R3DO95685 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP1R3DO95685 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.9■■□□□ 1.26
PPP1R3DO95685 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.9■■□□□ 1.26
PPP1R3DO95685 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.9■■□□□ 1.26
PPP1R3DO95685 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.9■■□□□ 1.26
PPP1R3DO95685 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms