Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
LTN1O94822 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC34.8■■■■□ 3.16
LTN1O94822 CEP120-209ENST00000515110 606 ntTSL 3 BASIC34.79■■■■□ 3.16
LTN1O94822 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
LTN1O94822 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC34.79■■■■□ 3.16
LTN1O94822 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
LTN1O94822 AC148477.6-201ENST00000623746 465 ntBASIC34.78■■■■□ 3.16
LTN1O94822 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
LTN1O94822 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC34.77■■■■□ 3.16
LTN1O94822 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16
LTN1O94822 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
LTN1O94822 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
LTN1O94822 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC34.75■■■■□ 3.15
LTN1O94822 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC34.74■■■■□ 3.15
LTN1O94822 AC008813.1-201ENST00000536597 885 ntBASIC34.74■■■■□ 3.15
LTN1O94822 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC34.74■■■■□ 3.15
LTN1O94822 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC34.74■■■■□ 3.15
LTN1O94822 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
LTN1O94822 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
LTN1O94822 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
LTN1O94822 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
LTN1O94822 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
LTN1O94822 RNF126P1-201ENST00000567452 1320 ntBASIC34.73■■■■□ 3.15
LTN1O94822 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC34.72■■■■□ 3.15
LTN1O94822 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
LTN1O94822 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
LTN1O94822 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
LTN1O94822 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC34.72■■■■□ 3.15
LTN1O94822 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
LTN1O94822 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
LTN1O94822 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
LTN1O94822 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC34.69■■■■□ 3.14
LTN1O94822 AC060814.1-201ENST00000554326 538 ntBASIC34.69■■■■□ 3.14
LTN1O94822 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC34.69■■■■□ 3.14
LTN1O94822 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC34.69■■■■□ 3.14
LTN1O94822 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
LTN1O94822 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
LTN1O94822 PEX7-203ENST00000541292 945 ntTSL 5 BASIC34.69■■■■□ 3.14
LTN1O94822 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC34.68■■■■□ 3.14
LTN1O94822 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
LTN1O94822 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC34.67■■■■□ 3.14
LTN1O94822 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC34.67■■■■□ 3.14
LTN1O94822 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
LTN1O94822 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC34.67■■■■□ 3.14
LTN1O94822 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC34.67■■■■□ 3.14
LTN1O94822 CHST11-203ENST00000547956 936 ntTSL 2 BASIC34.67■■■■□ 3.14
LTN1O94822 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC34.67■■■■□ 3.14
LTN1O94822 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC34.66■■■■□ 3.14
LTN1O94822 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
LTN1O94822 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
LTN1O94822 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC34.64■■■■□ 3.14
LTN1O94822 AC022413.1-201ENST00000624602 984 ntBASIC34.64■■■■□ 3.14
LTN1O94822 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC34.64■■■■□ 3.14
LTN1O94822 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
LTN1O94822 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
LTN1O94822 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC34.63■■■■□ 3.13
LTN1O94822 NTF6A-201ENST00000591175 560 ntBASIC34.63■■■■□ 3.13
LTN1O94822 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC34.63■■■■□ 3.13
LTN1O94822 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
LTN1O94822 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
LTN1O94822 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
LTN1O94822 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC34.61■■■■□ 3.13
LTN1O94822 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC34.6■■■■□ 3.13
LTN1O94822 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC34.6■■■■□ 3.13
LTN1O94822 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
LTN1O94822 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
LTN1O94822 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
LTN1O94822 AC110285.7-201ENST00000624417 1536 ntBASIC34.59■■■■□ 3.13
LTN1O94822 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC34.59■■■■□ 3.13
LTN1O94822 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC34.59■■■■□ 3.13
LTN1O94822 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
LTN1O94822 RPS2-210ENST00000530225 765 ntTSL 2 BASIC34.58■■■■□ 3.13
LTN1O94822 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC34.57■■■■□ 3.13
LTN1O94822 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC34.57■■■■□ 3.12
LTN1O94822 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
LTN1O94822 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
LTN1O94822 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC34.56■■■■□ 3.12
LTN1O94822 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
LTN1O94822 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
LTN1O94822 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
LTN1O94822 HES4-202ENST00000428771 1040 ntTSL 2 BASIC34.54■■■■□ 3.12
LTN1O94822 AC012354.3-201ENST00000623734 483 ntBASIC34.54■■■■□ 3.12
LTN1O94822 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
LTN1O94822 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC34.54■■■■□ 3.12
LTN1O94822 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC34.53■■■■□ 3.12
LTN1O94822 AC092296.2-201ENST00000589470 999 ntBASIC34.53■■■■□ 3.12
LTN1O94822 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC34.53■■■■□ 3.12
LTN1O94822 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
LTN1O94822 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC34.52■■■■□ 3.12
LTN1O94822 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
LTN1O94822 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
LTN1O94822 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
LTN1O94822 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
LTN1O94822 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
LTN1O94822 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC34.5■■■■□ 3.11
LTN1O94822 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
LTN1O94822 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC34.49■■■■□ 3.11
LTN1O94822 MIR219A2-201ENST00000608502 1504 ntBASIC34.49■■■■□ 3.11
LTN1O94822 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC34.49■■■■□ 3.11
LTN1O94822 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC34.49■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms