Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.53■■□□□ 1.68
NDUFS3O75489 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NDUFS3O75489 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NDUFS3O75489 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NDUFS3O75489 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.52■■□□□ 1.68
NDUFS3O75489 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.52■■□□□ 1.68
NDUFS3O75489 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NDUFS3O75489 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NDUFS3O75489 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
NDUFS3O75489 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NDUFS3O75489 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NDUFS3O75489 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
NDUFS3O75489 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NDUFS3O75489 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
NDUFS3O75489 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
NDUFS3O75489 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.5■■□□□ 1.67
NDUFS3O75489 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.49■■□□□ 1.67
NDUFS3O75489 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
NDUFS3O75489 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.49■■□□□ 1.67
NDUFS3O75489 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
NDUFS3O75489 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
NDUFS3O75489 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.49■■□□□ 1.67
NDUFS3O75489 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NDUFS3O75489 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NDUFS3O75489 RPS2P35-201ENST00000443417 897 ntBASIC25.48■■□□□ 1.67
NDUFS3O75489 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NDUFS3O75489 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
NDUFS3O75489 AC135983.2-203ENST00000454486 1613 ntBASIC25.48■■□□□ 1.67
NDUFS3O75489 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NDUFS3O75489 LINC00273-201ENST00000539813 1452 ntBASIC25.47■■□□□ 1.67
NDUFS3O75489 AC100797.4-201ENST00000631653 1827 ntBASIC25.47■■□□□ 1.67
NDUFS3O75489 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
NDUFS3O75489 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NDUFS3O75489 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NDUFS3O75489 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
NDUFS3O75489 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
NDUFS3O75489 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
NDUFS3O75489 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
NDUFS3O75489 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
NDUFS3O75489 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NDUFS3O75489 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NDUFS3O75489 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.43■■□□□ 1.66
NDUFS3O75489 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NDUFS3O75489 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NDUFS3O75489 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.43■■□□□ 1.66
NDUFS3O75489 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.42■■□□□ 1.66
NDUFS3O75489 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.42■■□□□ 1.66
NDUFS3O75489 WHAMMP2-203ENST00000563942 1603 ntBASIC25.42■■□□□ 1.66
NDUFS3O75489 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
NDUFS3O75489 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NDUFS3O75489 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.42■■□□□ 1.66
NDUFS3O75489 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.41■■□□□ 1.66
NDUFS3O75489 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.41■■□□□ 1.66
NDUFS3O75489 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
NDUFS3O75489 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NDUFS3O75489 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.4■■□□□ 1.66
NDUFS3O75489 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.4■■□□□ 1.66
NDUFS3O75489 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NDUFS3O75489 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
NDUFS3O75489 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
NDUFS3O75489 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
NDUFS3O75489 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
NDUFS3O75489 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.39■■□□□ 1.65
NDUFS3O75489 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.39■■□□□ 1.65
NDUFS3O75489 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
NDUFS3O75489 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.38■■□□□ 1.65
NDUFS3O75489 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NDUFS3O75489 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.38■■□□□ 1.65
NDUFS3O75489 DUX4L29-201ENST00000425409 679 ntBASIC25.38■■□□□ 1.65
NDUFS3O75489 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NDUFS3O75489 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
NDUFS3O75489 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.37■■□□□ 1.65
NDUFS3O75489 AC021231.2-201ENST00000594613 730 ntBASIC25.37■■□□□ 1.65
NDUFS3O75489 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NDUFS3O75489 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.37■■□□□ 1.65
NDUFS3O75489 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.36■■□□□ 1.65
NDUFS3O75489 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.36■■□□□ 1.65
NDUFS3O75489 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.36■■□□□ 1.65
NDUFS3O75489 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.36■■□□□ 1.65
NDUFS3O75489 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
NDUFS3O75489 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NDUFS3O75489 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.35■■□□□ 1.65
NDUFS3O75489 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NDUFS3O75489 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NDUFS3O75489 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NDUFS3O75489 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
NDUFS3O75489 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NDUFS3O75489 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NDUFS3O75489 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NDUFS3O75489 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NDUFS3O75489 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NDUFS3O75489 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NDUFS3O75489 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NDUFS3O75489 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NDUFS3O75489 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NDUFS3O75489 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NDUFS3O75489 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.3■■□□□ 1.64
NDUFS3O75489 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
NDUFS3O75489 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.3■■□□□ 1.64
NDUFS3O75489 AP002414.2-202ENST00000590929 1450 ntBASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms