Protein–RNA interactions for Protein: O60216

RAD21, Double-strand-break repair protein rad21 homolog, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD21O60216 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
RAD21O60216 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.13■■■□□ 2.41
RAD21O60216 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
RAD21O60216 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.12■■■□□ 2.41
RAD21O60216 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.12■■■□□ 2.41
RAD21O60216 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RAD21O60216 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.12■■■□□ 2.41
RAD21O60216 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RAD21O60216 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
RAD21O60216 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RAD21O60216 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
RAD21O60216 HSD17B1P1-201ENST00000590052 955 ntBASIC30.1■■■□□ 2.41
RAD21O60216 ST7-AS1-201ENST00000456775 1889 ntBASIC30.1■■■□□ 2.41
RAD21O60216 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
RAD21O60216 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
RAD21O60216 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.08■■■□□ 2.41
RAD21O60216 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.08■■■□□ 2.41
RAD21O60216 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
RAD21O60216 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.08■■■□□ 2.41
RAD21O60216 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.07■■■□□ 2.4
RAD21O60216 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RAD21O60216 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
RAD21O60216 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
RAD21O60216 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
RAD21O60216 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RAD21O60216 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RAD21O60216 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RAD21O60216 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RAD21O60216 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RAD21O60216 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RAD21O60216 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RAD21O60216 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
RAD21O60216 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
RAD21O60216 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
RAD21O60216 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RAD21O60216 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.04■■■□□ 2.4
RAD21O60216 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
RAD21O60216 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
RAD21O60216 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
RAD21O60216 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RAD21O60216 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RAD21O60216 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
RAD21O60216 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
RAD21O60216 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RAD21O60216 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RAD21O60216 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.01■■■□□ 2.39
RAD21O60216 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RAD21O60216 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30■■■□□ 2.39
RAD21O60216 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
RAD21O60216 AC110285.7-201ENST00000624417 1536 ntBASIC29.99■■■□□ 2.39
RAD21O60216 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.98■■■□□ 2.39
RAD21O60216 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
RAD21O60216 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RAD21O60216 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.97■■■□□ 2.39
RAD21O60216 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.97■■■□□ 2.39
RAD21O60216 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.97■■■□□ 2.39
RAD21O60216 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RAD21O60216 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RAD21O60216 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.39
RAD21O60216 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.95■■■□□ 2.39
RAD21O60216 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RAD21O60216 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RAD21O60216 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
RAD21O60216 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RAD21O60216 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.93■■■□□ 2.38
RAD21O60216 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RAD21O60216 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.93■■■□□ 2.38
RAD21O60216 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RAD21O60216 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RAD21O60216 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
RAD21O60216 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RAD21O60216 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
RAD21O60216 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.92■■■□□ 2.38
RAD21O60216 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.91■■■□□ 2.38
RAD21O60216 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.91■■■□□ 2.38
RAD21O60216 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
RAD21O60216 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RAD21O60216 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
RAD21O60216 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
RAD21O60216 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
RAD21O60216 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RAD21O60216 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RAD21O60216 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RAD21O60216 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.88■■■□□ 2.37
RAD21O60216 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
RAD21O60216 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RAD21O60216 AC008813.1-201ENST00000536597 885 ntBASIC29.87■■■□□ 2.37
RAD21O60216 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.87■■■□□ 2.37
RAD21O60216 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.87■■■□□ 2.37
RAD21O60216 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAD21O60216 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
RAD21O60216 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
RAD21O60216 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAD21O60216 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAD21O60216 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.86■■■□□ 2.37
RAD21O60216 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RAD21O60216 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.85■■■□□ 2.37
RAD21O60216 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RAD21O60216 GPX1-201ENST00000419349 1106 ntBASIC29.85■■■□□ 2.37
RAD21O60216 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.85■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms