Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.89■□□□□ 0.94
LINC00473A8K010 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
LINC00473A8K010 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00473A8K010 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00473A8K010 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00473A8K010 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LINC00473A8K010 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.89■□□□□ 0.93
LINC00473A8K010 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00473A8K010 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00473A8K010 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.88■□□□□ 0.93
LINC00473A8K010 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00473A8K010 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.88■□□□□ 0.93
LINC00473A8K010 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00473A8K010 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.88■□□□□ 0.93
LINC00473A8K010 BX255925.1-201ENST00000566954 1854 ntBASIC20.88■□□□□ 0.93
LINC00473A8K010 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LINC00473A8K010 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00473A8K010 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00473A8K010 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00473A8K010 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC00473A8K010 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00473A8K010 AC005559.1-201ENST00000589661 871 ntBASIC20.85■□□□□ 0.93
LINC00473A8K010 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00473A8K010 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00473A8K010 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.85■□□□□ 0.93
LINC00473A8K010 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LINC00473A8K010 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.84■□□□□ 0.93
LINC00473A8K010 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LINC00473A8K010 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00473A8K010 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00473A8K010 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.84■□□□□ 0.93
LINC00473A8K010 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00473A8K010 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LINC00473A8K010 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.82■□□□□ 0.92
LINC00473A8K010 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00473A8K010 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00473A8K010 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00473A8K010 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LINC00473A8K010 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00473A8K010 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00473A8K010 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00473A8K010 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00473A8K010 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00473A8K010 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00473A8K010 LINC01003-201ENST00000564834 1764 ntBASIC20.8■□□□□ 0.92
LINC00473A8K010 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00473A8K010 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.8■□□□□ 0.92
LINC00473A8K010 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00473A8K010 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LINC00473A8K010 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00473A8K010 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LINC00473A8K010 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.79■□□□□ 0.92
LINC00473A8K010 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00473A8K010 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
LINC00473A8K010 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LINC00473A8K010 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00473A8K010 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00473A8K010 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00473A8K010 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00473A8K010 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00473A8K010 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00473A8K010 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
LINC00473A8K010 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00473A8K010 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
LINC00473A8K010 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.76■□□□□ 0.91
LINC00473A8K010 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00473A8K010 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00473A8K010 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00473A8K010 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00473A8K010 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
LINC00473A8K010 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC00473A8K010 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00473A8K010 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00473A8K010 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.75■□□□□ 0.91
LINC00473A8K010 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.75■□□□□ 0.91
LINC00473A8K010 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00473A8K010 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00473A8K010 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00473A8K010 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.74■□□□□ 0.91
LINC00473A8K010 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.74■□□□□ 0.91
LINC00473A8K010 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.74■□□□□ 0.91
LINC00473A8K010 DUX4L28-201ENST00000623687 678 ntBASIC20.74■□□□□ 0.91
LINC00473A8K010 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LINC00473A8K010 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00473A8K010 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00473A8K010 AC108673.1-201ENST00000510422 1159 ntBASIC20.73■□□□□ 0.91
LINC00473A8K010 MIR6090-201ENST00000622481 60 ntBASIC20.73■□□□□ 0.91
LINC00473A8K010 AC135983.2-203ENST00000454486 1613 ntBASIC20.73■□□□□ 0.91
LINC00473A8K010 AP002414.2-202ENST00000590929 1450 ntBASIC20.72■□□□□ 0.91
LINC00473A8K010 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LINC00473A8K010 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LINC00473A8K010 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00473A8K010 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00473A8K010 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00473A8K010 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00473A8K010 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.71■□□□□ 0.91
LINC00473A8K010 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00473A8K010 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.71■□□□□ 0.91
LINC00473A8K010 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.7■□□□□ 0.9
LINC00473A8K010 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms