Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.46■■□□□ 1.83
SHISA7A6NL88 AC135983.2-203ENST00000454486 1613 ntBASIC26.46■■□□□ 1.83
SHISA7A6NL88 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SHISA7A6NL88 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SHISA7A6NL88 AC008813.1-201ENST00000536597 885 ntBASIC26.45■■□□□ 1.82
SHISA7A6NL88 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
SHISA7A6NL88 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.44■■□□□ 1.82
SHISA7A6NL88 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHISA7A6NL88 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SHISA7A6NL88 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.43■■□□□ 1.82
SHISA7A6NL88 AC127502.1-201ENST00000399971 1502 ntBASIC26.43■■□□□ 1.82
SHISA7A6NL88 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
SHISA7A6NL88 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.41■■□□□ 1.82
SHISA7A6NL88 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.4■■□□□ 1.82
SHISA7A6NL88 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.4■■□□□ 1.82
SHISA7A6NL88 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHISA7A6NL88 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHISA7A6NL88 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHISA7A6NL88 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SHISA7A6NL88 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
SHISA7A6NL88 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHISA7A6NL88 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SHISA7A6NL88 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHISA7A6NL88 U85056.1-201ENST00000616429 682 ntBASIC26.38■■□□□ 1.81
SHISA7A6NL88 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SHISA7A6NL88 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
SHISA7A6NL88 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SHISA7A6NL88 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
SHISA7A6NL88 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHISA7A6NL88 AC018358.1-201ENST00000631079 1402 ntBASIC26.36■■□□□ 1.81
SHISA7A6NL88 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SHISA7A6NL88 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHISA7A6NL88 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.35■■□□□ 1.81
SHISA7A6NL88 AC060814.1-201ENST00000554326 538 ntBASIC26.35■■□□□ 1.81
SHISA7A6NL88 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SHISA7A6NL88 AL033527.3-201ENST00000566366 1196 ntBASIC26.34■■□□□ 1.81
SHISA7A6NL88 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SHISA7A6NL88 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.34■■□□□ 1.81
SHISA7A6NL88 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.33■■□□□ 1.81
SHISA7A6NL88 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHISA7A6NL88 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHISA7A6NL88 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.32■■□□□ 1.8
SHISA7A6NL88 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SHISA7A6NL88 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.31■■□□□ 1.8
SHISA7A6NL88 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SHISA7A6NL88 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SHISA7A6NL88 AC148477.6-201ENST00000623746 465 ntBASIC26.31■■□□□ 1.8
SHISA7A6NL88 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SHISA7A6NL88 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
SHISA7A6NL88 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SHISA7A6NL88 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
SHISA7A6NL88 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.29■■□□□ 1.8
SHISA7A6NL88 AC110285.7-201ENST00000624417 1536 ntBASIC26.29■■□□□ 1.8
SHISA7A6NL88 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SHISA7A6NL88 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
SHISA7A6NL88 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.27■■□□□ 1.8
SHISA7A6NL88 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SHISA7A6NL88 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
SHISA7A6NL88 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SHISA7A6NL88 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.26■■□□□ 1.79
SHISA7A6NL88 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.26■■□□□ 1.79
SHISA7A6NL88 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
SHISA7A6NL88 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHISA7A6NL88 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SHISA7A6NL88 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SHISA7A6NL88 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHISA7A6NL88 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.24■■□□□ 1.79
SHISA7A6NL88 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHISA7A6NL88 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.24■■□□□ 1.79
SHISA7A6NL88 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHISA7A6NL88 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHISA7A6NL88 AC092296.2-201ENST00000589470 999 ntBASIC26.23■■□□□ 1.79
SHISA7A6NL88 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHISA7A6NL88 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHISA7A6NL88 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
SHISA7A6NL88 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SHISA7A6NL88 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SHISA7A6NL88 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SHISA7A6NL88 KRT18P60-201ENST00000312876 1297 ntBASIC26.21■■□□□ 1.79
SHISA7A6NL88 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.21■■□□□ 1.79
SHISA7A6NL88 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.21■■□□□ 1.79
SHISA7A6NL88 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.21■■□□□ 1.79
SHISA7A6NL88 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.2■■□□□ 1.78
SHISA7A6NL88 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.2■■□□□ 1.78
SHISA7A6NL88 MIR219A2-201ENST00000608502 1504 ntBASIC26.19■■□□□ 1.78
SHISA7A6NL88 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHISA7A6NL88 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHISA7A6NL88 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
SHISA7A6NL88 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SHISA7A6NL88 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHISA7A6NL88 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SHISA7A6NL88 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SHISA7A6NL88 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.18■■□□□ 1.78
SHISA7A6NL88 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.18■■□□□ 1.78
SHISA7A6NL88 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SHISA7A6NL88 AC004987.1-201ENST00000428627 508 ntBASIC26.17■■□□□ 1.78
SHISA7A6NL88 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SHISA7A6NL88 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SHISA7A6NL88 AL135925.1-201ENST00000605920 1701 ntBASIC26.16■■□□□ 1.78
SHISA7A6NL88 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms