Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRDV1A0A1B0GX56 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRDV1A0A1B0GX56 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRDV1A0A1B0GX56 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRDV1A0A1B0GX56 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRDV1A0A1B0GX56 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.61■■□□□ 1.21
TRDV1A0A1B0GX56 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.61■■□□□ 1.21
TRDV1A0A1B0GX56 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRDV1A0A1B0GX56 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRDV1A0A1B0GX56 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRDV1A0A1B0GX56 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRDV1A0A1B0GX56 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRDV1A0A1B0GX56 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRDV1A0A1B0GX56 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
TRDV1A0A1B0GX56 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.59■■□□□ 1.21
TRDV1A0A1B0GX56 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRDV1A0A1B0GX56 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRDV1A0A1B0GX56 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
TRDV1A0A1B0GX56 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRDV1A0A1B0GX56 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRDV1A0A1B0GX56 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.2
TRDV1A0A1B0GX56 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.57■■□□□ 1.2
TRDV1A0A1B0GX56 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRDV1A0A1B0GX56 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.57■■□□□ 1.2
TRDV1A0A1B0GX56 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRDV1A0A1B0GX56 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
TRDV1A0A1B0GX56 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRDV1A0A1B0GX56 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TRDV1A0A1B0GX56 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRDV1A0A1B0GX56 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRDV1A0A1B0GX56 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRDV1A0A1B0GX56 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
TRDV1A0A1B0GX56 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.52■■□□□ 1.2
TRDV1A0A1B0GX56 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRDV1A0A1B0GX56 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRDV1A0A1B0GX56 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.51■■□□□ 1.19
TRDV1A0A1B0GX56 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRDV1A0A1B0GX56 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRDV1A0A1B0GX56 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRDV1A0A1B0GX56 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRDV1A0A1B0GX56 AC091060.1-201ENST00000623524 1766 ntBASIC22.5■■□□□ 1.19
TRDV1A0A1B0GX56 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
TRDV1A0A1B0GX56 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRDV1A0A1B0GX56 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRDV1A0A1B0GX56 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.49■■□□□ 1.19
TRDV1A0A1B0GX56 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRDV1A0A1B0GX56 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRDV1A0A1B0GX56 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.48■■□□□ 1.19
TRDV1A0A1B0GX56 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRDV1A0A1B0GX56 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRDV1A0A1B0GX56 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRDV1A0A1B0GX56 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
TRDV1A0A1B0GX56 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRDV1A0A1B0GX56 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRDV1A0A1B0GX56 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRDV1A0A1B0GX56 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRDV1A0A1B0GX56 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRDV1A0A1B0GX56 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRDV1A0A1B0GX56 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRDV1A0A1B0GX56 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRDV1A0A1B0GX56 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.46■■□□□ 1.19
TRDV1A0A1B0GX56 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.46■■□□□ 1.19
TRDV1A0A1B0GX56 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRDV1A0A1B0GX56 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
TRDV1A0A1B0GX56 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
TRDV1A0A1B0GX56 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRDV1A0A1B0GX56 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.45■■□□□ 1.18
TRDV1A0A1B0GX56 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRDV1A0A1B0GX56 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRDV1A0A1B0GX56 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
TRDV1A0A1B0GX56 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.44■■□□□ 1.18
TRDV1A0A1B0GX56 AL133380.1-201ENST00000506013 324 ntBASIC22.44■■□□□ 1.18
TRDV1A0A1B0GX56 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRDV1A0A1B0GX56 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
TRDV1A0A1B0GX56 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRDV1A0A1B0GX56 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TRDV1A0A1B0GX56 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRDV1A0A1B0GX56 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRDV1A0A1B0GX56 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.42■■□□□ 1.18
TRDV1A0A1B0GX56 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.42■■□□□ 1.18
TRDV1A0A1B0GX56 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.42■■□□□ 1.18
TRDV1A0A1B0GX56 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRDV1A0A1B0GX56 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRDV1A0A1B0GX56 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRDV1A0A1B0GX56 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRDV1A0A1B0GX56 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRDV1A0A1B0GX56 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
TRDV1A0A1B0GX56 AC127502.1-201ENST00000399971 1502 ntBASIC22.38■■□□□ 1.17
TRDV1A0A1B0GX56 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
TRDV1A0A1B0GX56 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.38■■□□□ 1.17
TRDV1A0A1B0GX56 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRDV1A0A1B0GX56 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRDV1A0A1B0GX56 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
TRDV1A0A1B0GX56 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.37■■□□□ 1.17
TRDV1A0A1B0GX56 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRDV1A0A1B0GX56 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.36■■□□□ 1.17
TRDV1A0A1B0GX56 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRDV1A0A1B0GX56 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRDV1A0A1B0GX56 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRDV1A0A1B0GX56 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms