Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC004987.1-201ENST00000428627 508 ntBASIC26.16■■□□□ 1.78
CFAP54Q96N23 AC022413.1-201ENST00000624602 984 ntBASIC26.15■■□□□ 1.78
CFAP54Q96N23 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFAP54Q96N23 ATP5G2P3-201ENST00000429083 425 ntBASIC26.13■■□□□ 1.77
CFAP54Q96N23 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.13■■□□□ 1.77
CFAP54Q96N23 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CFAP54Q96N23 AC131212.1-201ENST00000613771 668 ntBASIC26.11■■□□□ 1.77
CFAP54Q96N23 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
CFAP54Q96N23 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.1■■□□□ 1.77
CFAP54Q96N23 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CFAP54Q96N23 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CFAP54Q96N23 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CFAP54Q96N23 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.08■■□□□ 1.77
CFAP54Q96N23 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CFAP54Q96N23 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.76
CFAP54Q96N23 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
CFAP54Q96N23 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CFAP54Q96N23 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP54Q96N23 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CFAP54Q96N23 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.04■■□□□ 1.76
CFAP54Q96N23 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CFAP54Q96N23 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CFAP54Q96N23 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CFAP54Q96N23 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.03■■□□□ 1.76
CFAP54Q96N23 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.03■■□□□ 1.76
CFAP54Q96N23 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CFAP54Q96N23 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP54Q96N23 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP54Q96N23 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP54Q96N23 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.01■■□□□ 1.75
CFAP54Q96N23 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.01■■□□□ 1.75
CFAP54Q96N23 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26■■□□□ 1.75
CFAP54Q96N23 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
CFAP54Q96N23 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26■■□□□ 1.75
CFAP54Q96N23 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
CFAP54Q96N23 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CFAP54Q96N23 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CFAP54Q96N23 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.99■■□□□ 1.75
CFAP54Q96N23 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.98■■□□□ 1.75
CFAP54Q96N23 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CFAP54Q96N23 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.98■■□□□ 1.75
CFAP54Q96N23 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CFAP54Q96N23 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CFAP54Q96N23 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFAP54Q96N23 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.95■■□□□ 1.75
CFAP54Q96N23 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.75
CFAP54Q96N23 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CFAP54Q96N23 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
CFAP54Q96N23 THA1P-201ENST00000590384 1145 ntBASIC25.94■■□□□ 1.74
CFAP54Q96N23 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.94■■□□□ 1.74
CFAP54Q96N23 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
CFAP54Q96N23 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP54Q96N23 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP54Q96N23 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP54Q96N23 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.93■■□□□ 1.74
CFAP54Q96N23 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.92■■□□□ 1.74
CFAP54Q96N23 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.92■■□□□ 1.74
CFAP54Q96N23 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CFAP54Q96N23 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.91■■□□□ 1.74
CFAP54Q96N23 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP54Q96N23 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.89■■□□□ 1.74
CFAP54Q96N23 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CFAP54Q96N23 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.73
CFAP54Q96N23 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.88■■□□□ 1.73
CFAP54Q96N23 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.86■■□□□ 1.73
CFAP54Q96N23 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CFAP54Q96N23 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CFAP54Q96N23 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.86■■□□□ 1.73
CFAP54Q96N23 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP54Q96N23 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.85■■□□□ 1.73
CFAP54Q96N23 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.84■■□□□ 1.73
CFAP54Q96N23 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
CFAP54Q96N23 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP54Q96N23 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.83■■□□□ 1.73
CFAP54Q96N23 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP54Q96N23 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP54Q96N23 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.83■■□□□ 1.73
CFAP54Q96N23 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
CFAP54Q96N23 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.82■■□□□ 1.72
CFAP54Q96N23 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP54Q96N23 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP54Q96N23 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP54Q96N23 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.8■■□□□ 1.72
CFAP54Q96N23 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP54Q96N23 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CFAP54Q96N23 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP54Q96N23 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.79■■□□□ 1.72
CFAP54Q96N23 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
CFAP54Q96N23 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.78■■□□□ 1.72
CFAP54Q96N23 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.78■■□□□ 1.72
CFAP54Q96N23 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP54Q96N23 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.77■■□□□ 1.72
CFAP54Q96N23 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP54Q96N23 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP54Q96N23 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP54Q96N23 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.77■■□□□ 1.72
CFAP54Q96N23 AC060814.1-201ENST00000554326 538 ntBASIC25.77■■□□□ 1.72
CFAP54Q96N23 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.76■■□□□ 1.71
CFAP54Q96N23 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CFAP54Q96N23 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms