Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
GRIN3AQ8TCU5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
GRIN3AQ8TCU5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
GRIN3AQ8TCU5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
GRIN3AQ8TCU5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.37■■□□□ 1.81
GRIN3AQ8TCU5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
GRIN3AQ8TCU5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
GRIN3AQ8TCU5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.36■■□□□ 1.81
GRIN3AQ8TCU5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
GRIN3AQ8TCU5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
GRIN3AQ8TCU5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
GRIN3AQ8TCU5 ST7-AS1-201ENST00000456775 1889 ntBASIC26.35■■□□□ 1.81
GRIN3AQ8TCU5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
GRIN3AQ8TCU5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
GRIN3AQ8TCU5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
GRIN3AQ8TCU5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
GRIN3AQ8TCU5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.34■■□□□ 1.81
GRIN3AQ8TCU5 LINC01971-201ENST00000617888 1048 ntBASIC26.34■■□□□ 1.81
GRIN3AQ8TCU5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
GRIN3AQ8TCU5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
GRIN3AQ8TCU5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
GRIN3AQ8TCU5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
GRIN3AQ8TCU5 HLA-V-202ENST00000446817 847 ntBASIC26.32■■□□□ 1.8
GRIN3AQ8TCU5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.32■■□□□ 1.8
GRIN3AQ8TCU5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
GRIN3AQ8TCU5 AC127502.1-201ENST00000399971 1502 ntBASIC26.31■■□□□ 1.8
GRIN3AQ8TCU5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.31■■□□□ 1.8
GRIN3AQ8TCU5 ABCB10P1-201ENST00000614297 2181 ntBASIC26.3■■□□□ 1.8
GRIN3AQ8TCU5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.3■■□□□ 1.8
GRIN3AQ8TCU5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.3■■□□□ 1.8
GRIN3AQ8TCU5 DUX4L11-201ENST00000611504 1267 ntBASIC26.3■■□□□ 1.8
GRIN3AQ8TCU5 DUX4L12-201ENST00000614593 1267 ntBASIC26.3■■□□□ 1.8
GRIN3AQ8TCU5 DUX4L14-201ENST00000621227 1267 ntBASIC26.3■■□□□ 1.8
GRIN3AQ8TCU5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
GRIN3AQ8TCU5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
GRIN3AQ8TCU5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.29■■□□□ 1.8
GRIN3AQ8TCU5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.29■■□□□ 1.8
GRIN3AQ8TCU5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
GRIN3AQ8TCU5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.28■■□□□ 1.8
GRIN3AQ8TCU5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.28■■□□□ 1.8
GRIN3AQ8TCU5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
GRIN3AQ8TCU5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.26■■□□□ 1.79
GRIN3AQ8TCU5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
GRIN3AQ8TCU5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.25■■□□□ 1.79
GRIN3AQ8TCU5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
GRIN3AQ8TCU5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
GRIN3AQ8TCU5 LINC00273-201ENST00000539813 1452 ntBASIC26.24■■□□□ 1.79
GRIN3AQ8TCU5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
GRIN3AQ8TCU5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.24■■□□□ 1.79
GRIN3AQ8TCU5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
GRIN3AQ8TCU5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
GRIN3AQ8TCU5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
GRIN3AQ8TCU5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.23■■□□□ 1.79
GRIN3AQ8TCU5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
GRIN3AQ8TCU5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.22■■□□□ 1.79
GRIN3AQ8TCU5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.22■■□□□ 1.79
GRIN3AQ8TCU5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.22■■□□□ 1.79
GRIN3AQ8TCU5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
GRIN3AQ8TCU5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
GRIN3AQ8TCU5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.21■■□□□ 1.79
GRIN3AQ8TCU5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.2■■□□□ 1.79
GRIN3AQ8TCU5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
GRIN3AQ8TCU5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.2■■□□□ 1.78
GRIN3AQ8TCU5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.2■■□□□ 1.78
GRIN3AQ8TCU5 CR559946.2-201ENST00000623684 991 ntBASIC26.2■■□□□ 1.78
GRIN3AQ8TCU5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.2■■□□□ 1.78
GRIN3AQ8TCU5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
GRIN3AQ8TCU5 MIR3648-2-201ENST00000581792 180 ntBASIC26.19■■□□□ 1.78
GRIN3AQ8TCU5 MIR3648-1-201ENST00000615959 180 ntBASIC26.19■■□□□ 1.78
GRIN3AQ8TCU5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
GRIN3AQ8TCU5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
GRIN3AQ8TCU5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.18■■□□□ 1.78
GRIN3AQ8TCU5 AC016575.1-201ENST00000607026 382 ntBASIC26.18■■□□□ 1.78
GRIN3AQ8TCU5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
GRIN3AQ8TCU5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
GRIN3AQ8TCU5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
GRIN3AQ8TCU5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.17■■□□□ 1.78
GRIN3AQ8TCU5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
GRIN3AQ8TCU5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.16■■□□□ 1.78
GRIN3AQ8TCU5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
GRIN3AQ8TCU5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
GRIN3AQ8TCU5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.16■■□□□ 1.78
GRIN3AQ8TCU5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.16■■□□□ 1.78
GRIN3AQ8TCU5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
GRIN3AQ8TCU5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
GRIN3AQ8TCU5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.15■■□□□ 1.78
GRIN3AQ8TCU5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
GRIN3AQ8TCU5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
GRIN3AQ8TCU5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
GRIN3AQ8TCU5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
GRIN3AQ8TCU5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
GRIN3AQ8TCU5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
GRIN3AQ8TCU5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
GRIN3AQ8TCU5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.14■■□□□ 1.78
GRIN3AQ8TCU5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
GRIN3AQ8TCU5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
GRIN3AQ8TCU5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
GRIN3AQ8TCU5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
GRIN3AQ8TCU5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
GRIN3AQ8TCU5 DUX4L13-201ENST00000554103 1267 ntBASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms