Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PNMA1Q8ND90 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
PNMA1Q8ND90 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
PNMA1Q8ND90 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PNMA1Q8ND90 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PNMA1Q8ND90 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.4■■■□□ 2.46
PNMA1Q8ND90 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.4■■■□□ 2.46
PNMA1Q8ND90 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.4■■■□□ 2.46
PNMA1Q8ND90 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.39■■■□□ 2.46
PNMA1Q8ND90 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.39■■■□□ 2.46
PNMA1Q8ND90 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
PNMA1Q8ND90 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.38■■■□□ 2.45
PNMA1Q8ND90 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.38■■■□□ 2.45
PNMA1Q8ND90 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.38■■■□□ 2.45
PNMA1Q8ND90 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.38■■■□□ 2.45
PNMA1Q8ND90 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PNMA1Q8ND90 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PNMA1Q8ND90 LINC00273-201ENST00000539813 1452 ntBASIC30.36■■■□□ 2.45
PNMA1Q8ND90 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PNMA1Q8ND90 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.35■■■□□ 2.45
PNMA1Q8ND90 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PNMA1Q8ND90 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PNMA1Q8ND90 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PNMA1Q8ND90 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.33■■■□□ 2.45
PNMA1Q8ND90 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
PNMA1Q8ND90 LINC01971-201ENST00000617888 1048 ntBASIC30.32■■■□□ 2.44
PNMA1Q8ND90 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
PNMA1Q8ND90 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PNMA1Q8ND90 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.31■■■□□ 2.44
PNMA1Q8ND90 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PNMA1Q8ND90 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
PNMA1Q8ND90 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.3■■■□□ 2.44
PNMA1Q8ND90 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.3■■■□□ 2.44
PNMA1Q8ND90 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.3■■■□□ 2.44
PNMA1Q8ND90 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PNMA1Q8ND90 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.29■■■□□ 2.44
PNMA1Q8ND90 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
PNMA1Q8ND90 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
PNMA1Q8ND90 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
PNMA1Q8ND90 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PNMA1Q8ND90 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PNMA1Q8ND90 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
PNMA1Q8ND90 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
PNMA1Q8ND90 DUX4L11-201ENST00000611504 1267 ntBASIC30.25■■■□□ 2.43
PNMA1Q8ND90 DUX4L12-201ENST00000614593 1267 ntBASIC30.25■■■□□ 2.43
PNMA1Q8ND90 DUX4L14-201ENST00000621227 1267 ntBASIC30.25■■■□□ 2.43
PNMA1Q8ND90 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
PNMA1Q8ND90 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
PNMA1Q8ND90 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PNMA1Q8ND90 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
PNMA1Q8ND90 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
PNMA1Q8ND90 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PNMA1Q8ND90 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
PNMA1Q8ND90 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.23■■■□□ 2.43
PNMA1Q8ND90 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.23■■■□□ 2.43
PNMA1Q8ND90 AC135983.2-203ENST00000454486 1613 ntBASIC30.22■■■□□ 2.43
PNMA1Q8ND90 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
PNMA1Q8ND90 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PNMA1Q8ND90 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
PNMA1Q8ND90 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.21■■■□□ 2.43
PNMA1Q8ND90 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
PNMA1Q8ND90 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
PNMA1Q8ND90 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.21■■■□□ 2.43
PNMA1Q8ND90 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.2■■■□□ 2.43
PNMA1Q8ND90 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.2■■■□□ 2.43
PNMA1Q8ND90 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
PNMA1Q8ND90 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
PNMA1Q8ND90 WHAMMP2-203ENST00000563942 1603 ntBASIC30.19■■■□□ 2.42
PNMA1Q8ND90 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PNMA1Q8ND90 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
PNMA1Q8ND90 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
PNMA1Q8ND90 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PNMA1Q8ND90 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
PNMA1Q8ND90 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PNMA1Q8ND90 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.17■■■□□ 2.42
PNMA1Q8ND90 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PNMA1Q8ND90 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.16■■■□□ 2.42
PNMA1Q8ND90 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PNMA1Q8ND90 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PNMA1Q8ND90 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.15■■■□□ 2.42
PNMA1Q8ND90 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.15■■■□□ 2.42
PNMA1Q8ND90 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PNMA1Q8ND90 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.14■■■□□ 2.42
PNMA1Q8ND90 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PNMA1Q8ND90 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PNMA1Q8ND90 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PNMA1Q8ND90 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
PNMA1Q8ND90 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PNMA1Q8ND90 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PNMA1Q8ND90 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.12■■■□□ 2.41
PNMA1Q8ND90 DUX4L13-201ENST00000554103 1267 ntBASIC30.12■■■□□ 2.41
PNMA1Q8ND90 DUX4L15-201ENST00000611059 1267 ntBASIC30.12■■■□□ 2.41
PNMA1Q8ND90 DUX4L23-201ENST00000615195 1269 ntBASIC30.12■■■□□ 2.41
PNMA1Q8ND90 DUX4L24-201ENST00000617576 1269 ntBASIC30.12■■■□□ 2.41
PNMA1Q8ND90 DUX4L22-201ENST00000618238 1269 ntBASIC30.12■■■□□ 2.41
PNMA1Q8ND90 DUX4L20-201ENST00000619712 1269 ntBASIC30.12■■■□□ 2.41
PNMA1Q8ND90 DUX4L21-201ENST00000622058 1269 ntBASIC30.12■■■□□ 2.41
PNMA1Q8ND90 DUX4L10-201ENST00000622460 1267 ntBASIC30.12■■■□□ 2.41
PNMA1Q8ND90 DUX4L25-201ENST00000624915 1269 ntBASIC30.12■■■□□ 2.41
PNMA1Q8ND90 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms