Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.71■□□□□ 0.75
CDPF1Q6NVV7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDPF1Q6NVV7 AC120057.4-201ENST00000624722 1615 ntBASIC19.69■□□□□ 0.74
CDPF1Q6NVV7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDPF1Q6NVV7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDPF1Q6NVV7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDPF1Q6NVV7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDPF1Q6NVV7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.68■□□□□ 0.74
CDPF1Q6NVV7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDPF1Q6NVV7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDPF1Q6NVV7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDPF1Q6NVV7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDPF1Q6NVV7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.67■□□□□ 0.74
CDPF1Q6NVV7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CDPF1Q6NVV7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.67■□□□□ 0.74
CDPF1Q6NVV7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDPF1Q6NVV7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDPF1Q6NVV7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDPF1Q6NVV7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDPF1Q6NVV7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.65■□□□□ 0.74
CDPF1Q6NVV7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDPF1Q6NVV7 AC133561.1-201ENST00000568600 2415 ntBASIC19.65■□□□□ 0.74
CDPF1Q6NVV7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDPF1Q6NVV7 AP002365.1-201ENST00000603448 772 ntBASIC19.64■□□□□ 0.73
CDPF1Q6NVV7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDPF1Q6NVV7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDPF1Q6NVV7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.63■□□□□ 0.73
CDPF1Q6NVV7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CDPF1Q6NVV7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDPF1Q6NVV7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDPF1Q6NVV7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDPF1Q6NVV7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDPF1Q6NVV7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDPF1Q6NVV7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDPF1Q6NVV7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDPF1Q6NVV7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDPF1Q6NVV7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDPF1Q6NVV7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDPF1Q6NVV7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDPF1Q6NVV7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDPF1Q6NVV7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
CDPF1Q6NVV7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDPF1Q6NVV7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDPF1Q6NVV7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDPF1Q6NVV7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDPF1Q6NVV7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDPF1Q6NVV7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDPF1Q6NVV7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CDPF1Q6NVV7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDPF1Q6NVV7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDPF1Q6NVV7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CDPF1Q6NVV7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDPF1Q6NVV7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDPF1Q6NVV7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDPF1Q6NVV7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.58■□□□□ 0.72
CDPF1Q6NVV7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.58■□□□□ 0.72
CDPF1Q6NVV7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDPF1Q6NVV7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDPF1Q6NVV7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDPF1Q6NVV7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDPF1Q6NVV7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDPF1Q6NVV7 AC020928.2-201ENST00000588717 2197 ntBASIC19.56■□□□□ 0.72
CDPF1Q6NVV7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDPF1Q6NVV7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDPF1Q6NVV7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CDPF1Q6NVV7 DRD5P2-201ENST00000421395 2012 ntBASIC19.55■□□□□ 0.72
CDPF1Q6NVV7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.55■□□□□ 0.72
CDPF1Q6NVV7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDPF1Q6NVV7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDPF1Q6NVV7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDPF1Q6NVV7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDPF1Q6NVV7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDPF1Q6NVV7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDPF1Q6NVV7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CDPF1Q6NVV7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.53■□□□□ 0.72
CDPF1Q6NVV7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDPF1Q6NVV7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDPF1Q6NVV7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDPF1Q6NVV7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDPF1Q6NVV7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.52■□□□□ 0.72
CDPF1Q6NVV7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDPF1Q6NVV7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDPF1Q6NVV7 CLDN5-201ENST00000403084 2357 ntBASIC19.51■□□□□ 0.71
CDPF1Q6NVV7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDPF1Q6NVV7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.51■□□□□ 0.71
CDPF1Q6NVV7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDPF1Q6NVV7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDPF1Q6NVV7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDPF1Q6NVV7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CDPF1Q6NVV7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDPF1Q6NVV7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDPF1Q6NVV7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDPF1Q6NVV7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDPF1Q6NVV7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDPF1Q6NVV7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.5■□□□□ 0.71
CDPF1Q6NVV7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDPF1Q6NVV7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDPF1Q6NVV7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CDPF1Q6NVV7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.49■□□□□ 0.71
CDPF1Q6NVV7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms