Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SMIM17P0DL12 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.05■□□□□ 0.64
SMIM17P0DL12 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.05■□□□□ 0.64
SMIM17P0DL12 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM17P0DL12 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM17P0DL12 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SMIM17P0DL12 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM17P0DL12 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM17P0DL12 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.03■□□□□ 0.64
SMIM17P0DL12 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM17P0DL12 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM17P0DL12 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM17P0DL12 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.02■□□□□ 0.64
SMIM17P0DL12 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM17P0DL12 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMIM17P0DL12 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMIM17P0DL12 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMIM17P0DL12 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMIM17P0DL12 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SMIM17P0DL12 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMIM17P0DL12 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMIM17P0DL12 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMIM17P0DL12 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM17P0DL12 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMIM17P0DL12 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMIM17P0DL12 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMIM17P0DL12 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMIM17P0DL12 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.97■□□□□ 0.63
SMIM17P0DL12 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.97■□□□□ 0.63
SMIM17P0DL12 AP002365.1-201ENST00000603448 772 ntBASIC18.97■□□□□ 0.63
SMIM17P0DL12 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.97■□□□□ 0.63
SMIM17P0DL12 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SMIM17P0DL12 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM17P0DL12 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.96■□□□□ 0.63
SMIM17P0DL12 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM17P0DL12 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM17P0DL12 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM17P0DL12 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM17P0DL12 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.94■□□□□ 0.62
SMIM17P0DL12 AL139393.2-201ENST00000608721 2025 ntBASIC18.94■□□□□ 0.62
SMIM17P0DL12 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SMIM17P0DL12 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM17P0DL12 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM17P0DL12 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM17P0DL12 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM17P0DL12 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM17P0DL12 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM17P0DL12 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM17P0DL12 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM17P0DL12 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
SMIM17P0DL12 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMIM17P0DL12 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM17P0DL12 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM17P0DL12 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.92■□□□□ 0.62
SMIM17P0DL12 WASH5P-204ENST00000632292 975 ntBASIC18.92■□□□□ 0.62
SMIM17P0DL12 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM17P0DL12 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM17P0DL12 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM17P0DL12 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM17P0DL12 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM17P0DL12 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM17P0DL12 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM17P0DL12 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM17P0DL12 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM17P0DL12 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM17P0DL12 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM17P0DL12 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM17P0DL12 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
SMIM17P0DL12 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM17P0DL12 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMIM17P0DL12 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMIM17P0DL12 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.89■□□□□ 0.62
SMIM17P0DL12 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.89■□□□□ 0.61
SMIM17P0DL12 AL121749.1-202ENST00000609313 2153 ntBASIC18.89■□□□□ 0.61
SMIM17P0DL12 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SMIM17P0DL12 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM17P0DL12 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SMIM17P0DL12 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM17P0DL12 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM17P0DL12 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM17P0DL12 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM17P0DL12 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.88■□□□□ 0.61
SMIM17P0DL12 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM17P0DL12 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SMIM17P0DL12 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM17P0DL12 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM17P0DL12 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM17P0DL12 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM17P0DL12 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SMIM17P0DL12 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM17P0DL12 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.86■□□□□ 0.61
SMIM17P0DL12 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM17P0DL12 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM17P0DL12 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SMIM17P0DL12 DRD5P2-201ENST00000421395 2012 ntBASIC18.84■□□□□ 0.61
SMIM17P0DL12 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM17P0DL12 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SMIM17P0DL12 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM17P0DL12 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM17P0DL12 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms