Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCNYL3P0C7X3 ABCB10P1-201ENST00000614297 2181 ntBASIC24.91■■□□□ 1.58
CCNYL3P0C7X3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCNYL3P0C7X3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCNYL3P0C7X3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CCNYL3P0C7X3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CCNYL3P0C7X3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
CCNYL3P0C7X3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.89■■□□□ 1.58
CCNYL3P0C7X3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.88■■□□□ 1.57
CCNYL3P0C7X3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNYL3P0C7X3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNYL3P0C7X3 CR559946.2-201ENST00000623684 991 ntBASIC24.88■■□□□ 1.57
CCNYL3P0C7X3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CCNYL3P0C7X3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.87■■□□□ 1.57
CCNYL3P0C7X3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.86■■□□□ 1.57
CCNYL3P0C7X3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNYL3P0C7X3 AL161658.1-201ENST00000623641 1967 ntBASIC24.86■■□□□ 1.57
CCNYL3P0C7X3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CCNYL3P0C7X3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNYL3P0C7X3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNYL3P0C7X3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNYL3P0C7X3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNYL3P0C7X3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.85■■□□□ 1.57
CCNYL3P0C7X3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCNYL3P0C7X3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCNYL3P0C7X3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCNYL3P0C7X3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCNYL3P0C7X3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCNYL3P0C7X3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CCNYL3P0C7X3 DUX4L13-201ENST00000554103 1267 ntBASIC24.81■■□□□ 1.56
CCNYL3P0C7X3 DUX4L15-201ENST00000611059 1267 ntBASIC24.81■■□□□ 1.56
CCNYL3P0C7X3 DUX4L23-201ENST00000615195 1269 ntBASIC24.81■■□□□ 1.56
CCNYL3P0C7X3 DUX4L24-201ENST00000617576 1269 ntBASIC24.81■■□□□ 1.56
CCNYL3P0C7X3 DUX4L22-201ENST00000618238 1269 ntBASIC24.81■■□□□ 1.56
CCNYL3P0C7X3 DUX4L20-201ENST00000619712 1269 ntBASIC24.81■■□□□ 1.56
CCNYL3P0C7X3 DUX4L21-201ENST00000622058 1269 ntBASIC24.81■■□□□ 1.56
CCNYL3P0C7X3 DUX4L10-201ENST00000622460 1267 ntBASIC24.81■■□□□ 1.56
CCNYL3P0C7X3 DUX4L25-201ENST00000624915 1269 ntBASIC24.81■■□□□ 1.56
CCNYL3P0C7X3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.81■■□□□ 1.56
CCNYL3P0C7X3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.8■■□□□ 1.56
CCNYL3P0C7X3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCNYL3P0C7X3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.8■■□□□ 1.56
CCNYL3P0C7X3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CCNYL3P0C7X3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CCNYL3P0C7X3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCNYL3P0C7X3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCNYL3P0C7X3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCNYL3P0C7X3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCNYL3P0C7X3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CCNYL3P0C7X3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.78■■□□□ 1.56
CCNYL3P0C7X3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.77■■□□□ 1.56
CCNYL3P0C7X3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCNYL3P0C7X3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCNYL3P0C7X3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.77■■□□□ 1.56
CCNYL3P0C7X3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
CCNYL3P0C7X3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCNYL3P0C7X3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCNYL3P0C7X3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CCNYL3P0C7X3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCNYL3P0C7X3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CCNYL3P0C7X3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCNYL3P0C7X3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCNYL3P0C7X3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CCNYL3P0C7X3 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.74■■□□□ 1.55
CCNYL3P0C7X3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCNYL3P0C7X3 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.73■■□□□ 1.55
CCNYL3P0C7X3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCNYL3P0C7X3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CCNYL3P0C7X3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
CCNYL3P0C7X3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.72■■□□□ 1.55
CCNYL3P0C7X3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.72■■□□□ 1.55
CCNYL3P0C7X3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.71■■□□□ 1.55
CCNYL3P0C7X3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.71■■□□□ 1.55
CCNYL3P0C7X3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CCNYL3P0C7X3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
CCNYL3P0C7X3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCNYL3P0C7X3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCNYL3P0C7X3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.69■■□□□ 1.54
CCNYL3P0C7X3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CCNYL3P0C7X3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.69■■□□□ 1.54
CCNYL3P0C7X3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.69■■□□□ 1.54
CCNYL3P0C7X3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.69■■□□□ 1.54
CCNYL3P0C7X3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.69■■□□□ 1.54
CCNYL3P0C7X3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCNYL3P0C7X3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCNYL3P0C7X3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CCNYL3P0C7X3 AC010864.1-201ENST00000609407 1511 ntBASIC24.68■■□□□ 1.54
CCNYL3P0C7X3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCNYL3P0C7X3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCNYL3P0C7X3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCNYL3P0C7X3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCNYL3P0C7X3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CCNYL3P0C7X3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.67■■□□□ 1.54
CCNYL3P0C7X3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.66■■□□□ 1.54
CCNYL3P0C7X3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCNYL3P0C7X3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCNYL3P0C7X3 ABCB10P3-201ENST00000561950 2166 ntBASIC24.66■■□□□ 1.54
CCNYL3P0C7X3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CCNYL3P0C7X3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCNYL3P0C7X3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms