Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.96■□□□□ 0.95
SCAF4O95104 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.96■□□□□ 0.95
SCAF4O95104 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCAF4O95104 AL139393.2-201ENST00000608721 2025 ntBASIC20.95■□□□□ 0.94
SCAF4O95104 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCAF4O95104 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SCAF4O95104 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCAF4O95104 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SCAF4O95104 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.93■□□□□ 0.94
SCAF4O95104 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCAF4O95104 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SCAF4O95104 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.93■□□□□ 0.94
SCAF4O95104 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCAF4O95104 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCAF4O95104 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.92■□□□□ 0.94
SCAF4O95104 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.92■□□□□ 0.94
SCAF4O95104 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.91■□□□□ 0.94
SCAF4O95104 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCAF4O95104 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCAF4O95104 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCAF4O95104 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCAF4O95104 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCAF4O95104 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCAF4O95104 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCAF4O95104 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SCAF4O95104 DRD5P2-201ENST00000421395 2012 ntBASIC20.89■□□□□ 0.93
SCAF4O95104 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCAF4O95104 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCAF4O95104 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCAF4O95104 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.88■□□□□ 0.93
SCAF4O95104 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.88■□□□□ 0.93
SCAF4O95104 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.87■□□□□ 0.93
SCAF4O95104 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCAF4O95104 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SCAF4O95104 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCAF4O95104 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SCAF4O95104 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCAF4O95104 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCAF4O95104 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCAF4O95104 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SCAF4O95104 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCAF4O95104 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SCAF4O95104 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.84■□□□□ 0.93
SCAF4O95104 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.84■□□□□ 0.93
SCAF4O95104 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SCAF4O95104 SETD8P1-201ENST00000623146 1180 ntBASIC20.83■□□□□ 0.93
SCAF4O95104 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCAF4O95104 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SCAF4O95104 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SCAF4O95104 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCAF4O95104 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCAF4O95104 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
SCAF4O95104 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCAF4O95104 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCAF4O95104 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCAF4O95104 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.81■□□□□ 0.92
SCAF4O95104 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCAF4O95104 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SCAF4O95104 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCAF4O95104 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCAF4O95104 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCAF4O95104 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCAF4O95104 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCAF4O95104 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCAF4O95104 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCAF4O95104 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCAF4O95104 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCAF4O95104 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.78■□□□□ 0.92
SCAF4O95104 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCAF4O95104 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCAF4O95104 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.78■□□□□ 0.92
SCAF4O95104 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.77■□□□□ 0.92
SCAF4O95104 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCAF4O95104 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.76■□□□□ 0.91
SCAF4O95104 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SCAF4O95104 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCAF4O95104 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCAF4O95104 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SCAF4O95104 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCAF4O95104 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.75■□□□□ 0.91
SCAF4O95104 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCAF4O95104 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SCAF4O95104 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCAF4O95104 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCAF4O95104 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SCAF4O95104 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCAF4O95104 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCAF4O95104 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCAF4O95104 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCAF4O95104 AC097358.2-201ENST00000607541 1159 ntBASIC20.72■□□□□ 0.91
SCAF4O95104 WASH5P-204ENST00000632292 975 ntBASIC20.72■□□□□ 0.91
SCAF4O95104 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCAF4O95104 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCAF4O95104 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCAF4O95104 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCAF4O95104 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
SCAF4O95104 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCAF4O95104 BX255925.1-201ENST00000566954 1854 ntBASIC20.71■□□□□ 0.91
SCAF4O95104 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.71■□□□□ 0.91
SCAF4O95104 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms