Protein–RNA interactions for Protein: O00468

AGRN, Agrin, humanhuman

Predictions only

Length 2,067 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AGRNO00468 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
AGRNO00468 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AGRNO00468 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AGRNO00468 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AGRNO00468 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
AGRNO00468 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AGRNO00468 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
AGRNO00468 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AGRNO00468 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AGRNO00468 AC108673.1-201ENST00000510422 1159 ntBASIC19.35■□□□□ 0.69
AGRNO00468 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AGRNO00468 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
AGRNO00468 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AGRNO00468 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
AGRNO00468 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AGRNO00468 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AGRNO00468 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
AGRNO00468 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
AGRNO00468 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
AGRNO00468 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.33■□□□□ 0.69
AGRNO00468 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.33■□□□□ 0.69
AGRNO00468 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AGRNO00468 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AGRNO00468 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AGRNO00468 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.31■□□□□ 0.68
AGRNO00468 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.3■□□□□ 0.68
AGRNO00468 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.3■□□□□ 0.68
AGRNO00468 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
AGRNO00468 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.3■□□□□ 0.68
AGRNO00468 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.3■□□□□ 0.68
AGRNO00468 MIR6090-201ENST00000622481 60 ntBASIC19.29■□□□□ 0.68
AGRNO00468 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
AGRNO00468 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
AGRNO00468 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AGRNO00468 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AGRNO00468 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AGRNO00468 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.28■□□□□ 0.68
AGRNO00468 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AGRNO00468 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
AGRNO00468 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AGRNO00468 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.27■□□□□ 0.68
AGRNO00468 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
AGRNO00468 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
AGRNO00468 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AGRNO00468 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AGRNO00468 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AGRNO00468 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AGRNO00468 AL139393.2-201ENST00000608721 2025 ntBASIC19.26■□□□□ 0.67
AGRNO00468 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AGRNO00468 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AGRNO00468 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.24■□□□□ 0.67
AGRNO00468 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AGRNO00468 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AGRNO00468 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AGRNO00468 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AGRNO00468 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AGRNO00468 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
AGRNO00468 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AGRNO00468 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AGRNO00468 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AGRNO00468 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
AGRNO00468 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AGRNO00468 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AGRNO00468 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
AGRNO00468 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AGRNO00468 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AGRNO00468 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
AGRNO00468 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AGRNO00468 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
AGRNO00468 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AGRNO00468 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.2■□□□□ 0.66
AGRNO00468 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
AGRNO00468 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
AGRNO00468 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AGRNO00468 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
AGRNO00468 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
AGRNO00468 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AGRNO00468 AC127502.1-201ENST00000399971 1502 ntBASIC19.17■□□□□ 0.66
AGRNO00468 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AGRNO00468 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
AGRNO00468 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
AGRNO00468 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.17■□□□□ 0.66
AGRNO00468 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AGRNO00468 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
AGRNO00468 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.16■□□□□ 0.66
AGRNO00468 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.16■□□□□ 0.66
AGRNO00468 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AGRNO00468 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AGRNO00468 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
AGRNO00468 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AGRNO00468 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AGRNO00468 LINC00273-201ENST00000539813 1452 ntBASIC19.15■□□□□ 0.66
AGRNO00468 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
AGRNO00468 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AGRNO00468 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AGRNO00468 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
AGRNO00468 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AGRNO00468 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.14■□□□□ 0.65
AGRNO00468 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.14■□□□□ 0.65
AGRNO00468 AC135983.2-203ENST00000454486 1613 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms