Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF223E7ERA6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF223E7ERA6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RNF223E7ERA6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF223E7ERA6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RNF223E7ERA6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF223E7ERA6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF223E7ERA6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF223E7ERA6 RNF126P1-201ENST00000567452 1320 ntBASIC21.81■■□□□ 1.08
RNF223E7ERA6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF223E7ERA6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RNF223E7ERA6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF223E7ERA6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF223E7ERA6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RNF223E7ERA6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF223E7ERA6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF223E7ERA6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF223E7ERA6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF223E7ERA6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF223E7ERA6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF223E7ERA6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF223E7ERA6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RNF223E7ERA6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF223E7ERA6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF223E7ERA6 LINC00273-201ENST00000539813 1452 ntBASIC21.77■■□□□ 1.08
RNF223E7ERA6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF223E7ERA6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF223E7ERA6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF223E7ERA6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF223E7ERA6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
RNF223E7ERA6 AL161658.1-201ENST00000623641 1967 ntBASIC21.74■■□□□ 1.07
RNF223E7ERA6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RNF223E7ERA6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF223E7ERA6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RNF223E7ERA6 AC022413.1-201ENST00000624602 984 ntBASIC21.72■■□□□ 1.07
RNF223E7ERA6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF223E7ERA6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF223E7ERA6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF223E7ERA6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF223E7ERA6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF223E7ERA6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF223E7ERA6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF223E7ERA6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF223E7ERA6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RNF223E7ERA6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF223E7ERA6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF223E7ERA6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF223E7ERA6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF223E7ERA6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF223E7ERA6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF223E7ERA6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF223E7ERA6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF223E7ERA6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF223E7ERA6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF223E7ERA6 NTF6A-201ENST00000591175 560 ntBASIC21.66■■□□□ 1.06
RNF223E7ERA6 AC010864.1-201ENST00000609407 1511 ntBASIC21.65■■□□□ 1.06
RNF223E7ERA6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF223E7ERA6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF223E7ERA6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF223E7ERA6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF223E7ERA6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF223E7ERA6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF223E7ERA6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
RNF223E7ERA6 AC012354.3-201ENST00000623734 483 ntBASIC21.63■■□□□ 1.05
RNF223E7ERA6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF223E7ERA6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF223E7ERA6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RNF223E7ERA6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
RNF223E7ERA6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF223E7ERA6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RNF223E7ERA6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
RNF223E7ERA6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF223E7ERA6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RNF223E7ERA6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF223E7ERA6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF223E7ERA6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF223E7ERA6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF223E7ERA6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF223E7ERA6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF223E7ERA6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF223E7ERA6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF223E7ERA6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RNF223E7ERA6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF223E7ERA6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF223E7ERA6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF223E7ERA6 AC008813.1-201ENST00000536597 885 ntBASIC21.59■■□□□ 1.05
RNF223E7ERA6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.59■■□□□ 1.05
RNF223E7ERA6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF223E7ERA6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF223E7ERA6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF223E7ERA6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF223E7ERA6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF223E7ERA6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RNF223E7ERA6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms