Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV9-2A0A087WT02 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TRAV9-2A0A087WT02 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
TRAV9-2A0A087WT02 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV9-2A0A087WT02 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV9-2A0A087WT02 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV9-2A0A087WT02 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV9-2A0A087WT02 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV9-2A0A087WT02 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.08■□□□□ 0.64
TRAV9-2A0A087WT02 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV9-2A0A087WT02 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV9-2A0A087WT02 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV9-2A0A087WT02 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV9-2A0A087WT02 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRAV9-2A0A087WT02 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV9-2A0A087WT02 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRAV9-2A0A087WT02 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV9-2A0A087WT02 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV9-2A0A087WT02 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV9-2A0A087WT02 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV9-2A0A087WT02 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV9-2A0A087WT02 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV9-2A0A087WT02 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV9-2A0A087WT02 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV9-2A0A087WT02 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRAV9-2A0A087WT02 RARRES2P7-201ENST00000567349 469 ntBASIC19.05■□□□□ 0.64
TRAV9-2A0A087WT02 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV9-2A0A087WT02 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV9-2A0A087WT02 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV9-2A0A087WT02 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV9-2A0A087WT02 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV9-2A0A087WT02 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV9-2A0A087WT02 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV9-2A0A087WT02 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV9-2A0A087WT02 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV9-2A0A087WT02 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.02■□□□□ 0.64
TRAV9-2A0A087WT02 AL449106.1-201ENST00000608517 1980 ntBASIC19.02■□□□□ 0.64
TRAV9-2A0A087WT02 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.02■□□□□ 0.63
TRAV9-2A0A087WT02 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TRAV9-2A0A087WT02 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.02■□□□□ 0.63
TRAV9-2A0A087WT02 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV9-2A0A087WT02 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV9-2A0A087WT02 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV9-2A0A087WT02 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRAV9-2A0A087WT02 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV9-2A0A087WT02 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV9-2A0A087WT02 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV9-2A0A087WT02 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV9-2A0A087WT02 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19■□□□□ 0.63
TRAV9-2A0A087WT02 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV9-2A0A087WT02 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV9-2A0A087WT02 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV9-2A0A087WT02 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-2A0A087WT02 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-2A0A087WT02 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-2A0A087WT02 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-2A0A087WT02 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-2A0A087WT02 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV9-2A0A087WT02 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV9-2A0A087WT02 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV9-2A0A087WT02 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV9-2A0A087WT02 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV9-2A0A087WT02 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV9-2A0A087WT02 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV9-2A0A087WT02 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.96■□□□□ 0.63
TRAV9-2A0A087WT02 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV9-2A0A087WT02 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV9-2A0A087WT02 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TRAV9-2A0A087WT02 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRAV9-2A0A087WT02 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV9-2A0A087WT02 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRAV9-2A0A087WT02 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRAV9-2A0A087WT02 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV9-2A0A087WT02 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV9-2A0A087WT02 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV9-2A0A087WT02 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV9-2A0A087WT02 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAV9-2A0A087WT02 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRAV9-2A0A087WT02 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV9-2A0A087WT02 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV9-2A0A087WT02 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV9-2A0A087WT02 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
TRAV9-2A0A087WT02 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRAV9-2A0A087WT02 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV9-2A0A087WT02 DRD5P2-201ENST00000421395 2012 ntBASIC18.92■□□□□ 0.62
TRAV9-2A0A087WT02 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV9-2A0A087WT02 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV9-2A0A087WT02 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV9-2A0A087WT02 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV9-2A0A087WT02 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
TRAV9-2A0A087WT02 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV9-2A0A087WT02 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV9-2A0A087WT02 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRAV9-2A0A087WT02 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAV9-2A0A087WT02 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV9-2A0A087WT02 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV9-2A0A087WT02 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRAV9-2A0A087WT02 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV9-2A0A087WT02 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV9-2A0A087WT02 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms