Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.74■■■□□ 2.356e-9■□□□□ 9.5
DDX59Q5T1V6 CYHR1-207ENST00000528558 907 ntTSL 218.96■□□□□ 0.636e-9■□□□□ 9.5
DDX59Q5T1V6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.286e-9■□□□□ 9.5
DDX59Q5T1V6 CYHR1-206ENST00000526887 1012 ntTSL 315.58■□□□□ 0.086e-9■□□□□ 9.5
DDX59Q5T1V6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.91■■□□□ 1.747e-6■□□□□ 9.5
DDX59Q5T1V6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.03■■□□□ 1.447e-6■□□□□ 9.5
DDX59Q5T1V6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.227e-6■□□□□ 9.5
DDX59Q5T1V6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.077e-6■□□□□ 9.5
DDX59Q5T1V6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.65■■□□□ 1.067e-6■□□□□ 9.5
DDX59Q5T1V6 FSTL3-205ENST00000592058 589 ntTSL 521.42■■□□□ 1.027e-6■□□□□ 9.5
DDX59Q5T1V6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.817e-6■□□□□ 9.5
DDX59Q5T1V6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.737e-6■□□□□ 9.5
DDX59Q5T1V6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.727e-6■□□□□ 9.5
DDX59Q5T1V6 FSTL3-203ENST00000589185 537 ntTSL 218.99■□□□□ 0.637e-6■□□□□ 9.5
DDX59Q5T1V6 MAP3K11-202ENST00000524848 2139 ntTSL 218.79■□□□□ 0.67e-6■□□□□ 9.5
DDX59Q5T1V6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.42■□□□□ 0.547e-6■□□□□ 9.5
DDX59Q5T1V6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.28■□□□□ 0.527e-6■□□□□ 9.5
DDX59Q5T1V6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.26■□□□□ 0.517e-6■□□□□ 9.5
DDX59Q5T1V6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.15■□□□□ 0.57e-6■□□□□ 9.5
DDX59Q5T1V6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.12■□□□□ 0.492e-8■□□□□ 9.5
DDX59Q5T1V6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.487e-6■□□□□ 9.5
DDX59Q5T1V6 ANO7-208ENST00000481071 1905 ntTSL 517.52■□□□□ 0.47e-6■□□□□ 9.5
DDX59Q5T1V6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.4■□□□□ 0.387e-6■□□□□ 9.5
DDX59Q5T1V6 SLC22A7-204ENST00000436107 658 ntTSL 517.36■□□□□ 0.377e-6■□□□□ 9.5
DDX59Q5T1V6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.22■□□□□ 0.357e-6■□□□□ 9.5
DDX59Q5T1V6 MAP3K11-213ENST00000534432 664 ntTSL 317.16■□□□□ 0.347e-6■□□□□ 9.5
DDX59Q5T1V6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.347e-6■□□□□ 9.5
DDX59Q5T1V6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.312e-8■□□□□ 9.5
DDX59Q5T1V6 ANO7-205ENST00000459928 2139 ntTSL 1 (best)17■□□□□ 0.317e-6■□□□□ 9.5
DDX59Q5T1V6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.297e-6■□□□□ 9.5
DDX59Q5T1V6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.232e-8■□□□□ 9.5
DDX59Q5T1V6 MSI2-210ENST00000579505 577 ntTSL 316.41■□□□□ 0.227e-6■□□□□ 9.5
DDX59Q5T1V6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.217e-6■□□□□ 9.5
DDX59Q5T1V6 PCSK6-208ENST00000559417 1035 ntTSL 516.29■□□□□ 0.27e-6■□□□□ 9.5
DDX59Q5T1V6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.03■□□□□ 0.167e-6■□□□□ 9.5
DDX59Q5T1V6 CFL1-210ENST00000530945 1509 ntTSL 215.82■□□□□ 0.122e-8■□□□□ 9.5
DDX59Q5T1V6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.117e-6■□□□□ 9.5
DDX59Q5T1V6 POLD1-209ENST00000597963 737 ntTSL 215.64■□□□□ 0.097e-6■□□□□ 9.5
DDX59Q5T1V6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.59■□□□□ 0.097e-6■□□□□ 9.5
DDX59Q5T1V6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.5■□□□□ 0.077e-6■□□□□ 9.5
DDX59Q5T1V6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.24■□□□□ 0.037e-6■□□□□ 9.5
DDX59Q5T1V6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.037e-6■□□□□ 9.5
DDX59Q5T1V6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.81□□□□□ -0.047e-6■□□□□ 9.5
DDX59Q5T1V6 GRB7-212ENST00000584053 584 ntTSL 414.74□□□□□ -0.057e-6■□□□□ 9.5
DDX59Q5T1V6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.067e-6■□□□□ 9.5
DDX59Q5T1V6 ASGR1-207ENST00000574330 887 ntTSL 514.62□□□□□ -0.077e-6■□□□□ 9.5
DDX59Q5T1V6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.097e-6■□□□□ 9.5
DDX59Q5T1V6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.31□□□□□ -0.127e-6■□□□□ 9.5
DDX59Q5T1V6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.27□□□□□ -0.137e-6■□□□□ 9.5
DDX59Q5T1V6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.137e-6■□□□□ 9.5
DDX59Q5T1V6 ANO7-209ENST00000487192 2196 ntTSL 1 (best)14.23□□□□□ -0.137e-6■□□□□ 9.5
DDX59Q5T1V6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.167e-6■□□□□ 9.5
DDX59Q5T1V6 MSI2-207ENST00000579205 500 ntTSL 413.86□□□□□ -0.197e-6■□□□□ 9.5
DDX59Q5T1V6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.287e-6■□□□□ 9.5
DDX59Q5T1V6 PHKG2-211ENST00000569762 880 ntTSL 1 (best)13.14□□□□□ -0.317e-6■□□□□ 9.5
DDX59Q5T1V6 ASGR1-203ENST00000570576 627 ntTSL 512.6□□□□□ -0.397e-6■□□□□ 9.5
DDX59Q5T1V6 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.45□□□□□ -0.427e-6■□□□□ 9.5
DDX59Q5T1V6 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.19□□□□□ -0.462e-8■□□□□ 9.5
DDX59Q5T1V6 PCSK6-203ENST00000557794 1196 ntTSL 510.4□□□□□ -0.747e-6■□□□□ 9.5
DDX59Q5T1V6 CFL1-207ENST00000527752 766 ntTSL 510.34□□□□□ -0.752e-8■□□□□ 9.5
DDX59Q5T1V6 ANO7-201ENST00000274979 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.847e-6■□□□□ 9.5
DDX59Q5T1V6 MSI2-216ENST00000582772 398 ntTSL 33.79□□□□□ -1.87e-6■□□□□ 9.5
DDX59Q5T1V6 MSI2-215ENST00000582453 496 ntTSL 32.75□□□□□ -1.977e-6■□□□□ 9.5
DDX59Q5T1V6 MIR3664-201ENST00000579074 99 ntBASIC1.29□□□□□ -2.27e-6■□□□□ 9.5
DDX59Q5T1V6 MLXIPL-208ENST00000456640 706 ntTSL 515.66■□□□□ 0.13e-31■□□□□ 9.5
DDX59Q5T1V6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.862e-15■□□□□ 9.5
DDX59Q5T1V6 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC11.13□□□□□ -0.634e-6■□□□□ 9.4
DDX59Q5T1V6 LINC00106-202ENST00000434938 356 ntTSL 5 BASIC10.8□□□□□ -0.684e-6■□□□□ 9.4
DDX59Q5T1V6 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC10.03□□□□□ -0.89e-10■□□□□ 9.4
DDX59Q5T1V6 AL669831.3-207ENST00000635509 941 ntTSL 58.37□□□□□ -1.079e-10■□□□□ 9.4
DDX59Q5T1V6 AL669831.3-209ENST00000440200 413 ntTSL 54.88□□□□□ -1.639e-10■□□□□ 9.4
DDX59Q5T1V6 AL669831.3-203ENST00000419394 491 ntTSL 53.56□□□□□ -1.849e-10■□□□□ 9.4
DDX59Q5T1V6 MDK-209ENST00000489525 1339 ntTSL 522.52■■□□□ 1.24e-10■□□□□ 9.4
DDX59Q5T1V6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.044e-10■□□□□ 9.4
DDX59Q5T1V6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.954e-10■□□□□ 9.4
DDX59Q5T1V6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.924e-10■□□□□ 9.4
DDX59Q5T1V6 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.73■□□□□ 0.594e-10■□□□□ 9.4
DDX59Q5T1V6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.22■□□□□ 0.514e-10■□□□□ 9.4
DDX59Q5T1V6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.394e-10■□□□□ 9.4
DDX59Q5T1V6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.324e-10■□□□□ 9.4
DDX59Q5T1V6 SPG7-217ENST00000568151 544 ntTSL 420.55■□□□□ 0.886e-8■□□□□ 9.4
DDX59Q5T1V6 SPG7-214ENST00000566371 581 ntTSL 319.49■□□□□ 0.716e-8■□□□□ 9.4
DDX59Q5T1V6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.32■□□□□ 0.686e-8■□□□□ 9.4
DDX59Q5T1V6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.236e-8■□□□□ 9.4
DDX59Q5T1V6 PQLC1-210ENST00000589452 704 ntTSL 525.89■■□□□ 1.746e-7■□□□□ 9.4
DDX59Q5T1V6 PQLC1-214ENST00000593030 764 ntTSL 522.55■■□□□ 1.26e-7■□□□□ 9.4
DDX59Q5T1V6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.29■□□□□ 0.046e-7■□□□□ 9.4
DDX59Q5T1V6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.026e-7■□□□□ 9.4
DDX59Q5T1V6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.016e-7■□□□□ 9.4
DDX59Q5T1V6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.88□□□□□ -0.036e-7■□□□□ 9.4
DDX59Q5T1V6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.2□□□□□ -0.146e-7■□□□□ 9.4
DDX59Q5T1V6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.156e-7■□□□□ 9.4
DDX59Q5T1V6 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.156e-7■□□□□ 9.4
DDX59Q5T1V6 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.245e-6■□□□□ 9.4
DDX59Q5T1V6 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.92□□□□□ -0.346e-7■□□□□ 9.4
DDX59Q5T1V6 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC12.25□□□□□ -0.456e-7■□□□□ 9.4
DDX59Q5T1V6 RAB5B-203ENST00000546810 589 ntTSL 212.21□□□□□ -0.456e-7■□□□□ 9.4
DDX59Q5T1V6 RAB5B-204ENST00000548068 596 ntTSL 411.66□□□□□ -0.546e-7■□□□□ 9.4
DDX59Q5T1V6 RAB5B-206ENST00000549505 3148 ntTSL 1 (best)9.49□□□□□ -0.896e-7■□□□□ 9.4
DDX59Q5T1V6 EHBP1-205ENST00000413434 533 ntTSL 49.2□□□□□ -0.946e-7■□□□□ 9.4
Retrieved 100 of 7,289 protein–RNA pairs in 225.5 ms