RNA–Protein interactions for RNA: ENST00000593030.6

PQLC1-214, Transcript of PQ loop repeat containing 1, humanhuman

TSL 5

Gene PQLC1, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQLC1-214ENST00000593030 NISCHQ9Y2I1 1504 aa64.25■■■■■ 7.88
PQLC1-214ENST00000593030 ABCC9O60706 1549 aa57.97■■■■■ 6.87
PQLC1-214ENST00000593030 CCDC180Q9P1Z9 1646 aa57.66■■■■■ 6.82
PQLC1-214ENST00000593030 RB1CC1Q8TDY2 1594 aa55.03■■■■■ 6.4
PQLC1-214ENST00000593030 DNAJC5BQ9UF47 199 aa54.65■■■■■ 6.34
PQLC1-214ENST00000593030 NACADO15069 1562 aa54.62■■■■■ 6.33
PQLC1-214ENST00000593030 DCAF8L2P0C7V8 631 aa54.33■■■■■ 6.29
PQLC1-214ENST00000593030 PABPN1Q86U42 306 aaKnown RBP eCLIP53.98■■■■■ 6.23
PQLC1-214ENST00000593030 MYO15BQ96JP2 1530 aa53.83■■■■■ 6.21
PQLC1-214ENST00000593030 UNC13AQ9UPW8 1703 aa53.71■■■■■ 6.19
PQLC1-214ENST00000593030 BICRAQ9NZM4 1560 aa53.49■■■■■ 6.15
PQLC1-214ENST00000593030 ZCCHC6Q5VYS8 1495 aaKnown RBP53.21■■■■■ 6.11
PQLC1-214ENST00000593030 DCAF1Q9Y4B6 1507 aa53.05■■■■■ 6.08
PQLC1-214ENST00000593030 SHROOM4Q9ULL8 1493 aa52.72■■■■■ 6.03
PQLC1-214ENST00000593030 SCRIBQ14160 1630 aa52.58■■■■■ 6.01
PQLC1-214ENST00000593030 CC2D2AQ9P2K1 1620 aa52.33■■■■■ 5.97
PQLC1-214ENST00000593030 CECR2Q9BXF3 1484 aa52.24■■■■■ 5.95
PQLC1-214ENST00000593030 EIF4G1Q04637 1599 aaKnown RBP52.18■■■■■ 5.94
PQLC1-214ENST00000593030 NCAPD3P42695 1498 aa50.48■■■■■ 5.67
PQLC1-214ENST00000593030 DNAJC5Q9H3Z4 198 aa50.3■■■■■ 5.64
PQLC1-214ENST00000593030 ATAD2BQ9ULI0 1458 aa50.3■■■■■ 5.64
PQLC1-214ENST00000593030 SMARCA4P51532 1647 aa50.14■■■■■ 5.62
PQLC1-214ENST00000593030 SMARCA2P51531 1590 aa50.09■■■■■ 5.61
PQLC1-214ENST00000593030 HMGXB3Q12766 1538 aa50.05■■■■■ 5.6
PQLC1-214ENST00000593030 CUX2O14529 1486 aa50.04■■■■■ 5.6
PQLC1-214ENST00000593030 ERCC6Q03468 1493 aa50.04■■■■■ 5.6
PQLC1-214ENST00000593030 BAZ1AQ9NRL2 1556 aaPredicted RBP49.87■■■■■ 5.57
PQLC1-214ENST00000593030 BAZ1BQ9UIG0 1483 aaKnown RBP49.76■■■■■ 5.56
PQLC1-214ENST00000593030 NESP48681 1621 aa49.75■■■■■ 5.56
PQLC1-214ENST00000593030 PEG3Q9GZU2 1588 aa49.67■■■■■ 5.54
PQLC1-214ENST00000593030 MROH2BQ7Z745 1585 aa49.52■■■■■ 5.52
PQLC1-214ENST00000593030 LAMC3Q9Y6N6 1575 aa49.32■■■■■ 5.49
PQLC1-214ENST00000593030 THOC2Q8NI27 1593 aaKnown RBP49.25■■■■■ 5.47
PQLC1-214ENST00000593030 PDS5BQ9NTI5 1447 aa49.08■■■■■ 5.45
PQLC1-214ENST00000593030 KIF21AQ7Z4S6 1674 aa49.01■■■■■ 5.44
PQLC1-214ENST00000593030 CADPSQ9ULU8 1353 aa48.94■■■■■ 5.43
PQLC1-214ENST00000593030 WIZO95785 1651 aa48.86■■■■■ 5.41
PQLC1-214ENST00000593030 MRC2Q9UBG0 1479 aa48.67■■■■■ 5.38
PQLC1-214ENST00000593030 WDR62O43379 1518 aa48.55■■■■■ 5.36
PQLC1-214ENST00000593030 RSF1Q96T23 1441 aaPredicted RBP48.44■■■■■ 5.35
PQLC1-214ENST00000593030 CEP164Q9UPV0 1460 aa48.42■■■■■ 5.34
PQLC1-214ENST00000593030 FANCD2Q9BXW9 1451 aa48.36■■■■■ 5.33
PQLC1-214ENST00000593030 CFTRP13569 1480 aa48.33■■■■■ 5.33
PQLC1-214ENST00000593030 TOP2AP11388 1531 aaKnown RBP48.26■■■■■ 5.32
PQLC1-214ENST00000593030 URB2Q14146 1524 aaKnown RBP47.99■■■■■ 5.27
PQLC1-214ENST00000593030 TRIM41Q8WV44 630 aa47.99■■■■■ 5.27
PQLC1-214ENST00000593030 CCDC88BA6NC98 1476 aa47.75■■■■■ 5.23
PQLC1-214ENST00000593030 OSCARQ8IYS5 282 aa47.74■■■■■ 5.23
PQLC1-214ENST00000593030 PRDM2Q13029 1718 aa47.65■■■■■ 5.22
PQLC1-214ENST00000593030 IFT140Q96RY7 1462 aa47.47■■■■■ 5.19
PQLC1-214ENST00000593030 ZNF608Q9ULD9 1512 aaPredicted RBP47.45■■■■■ 5.19
PQLC1-214ENST00000593030 TOPBP1Q92547 1522 aa47.42■■■■■ 5.18
PQLC1-214ENST00000593030 ABCC8Q09428 1581 aa47.28■■■■■ 5.16
PQLC1-214ENST00000593030 DNMBPQ6XZF7 1577 aa47.2■■■■■ 5.15
PQLC1-214ENST00000593030 EIF4G3O43432 1585 aaKnown RBP47.11■■■■■ 5.13
PQLC1-214ENST00000593030 RIMBP3CA6NJZ7 1639 aa47.1■■■■■ 5.13
PQLC1-214ENST00000593030 RIMBP3BA6NNM3 1639 aa47.1■■■■■ 5.13
PQLC1-214ENST00000593030 RIMBP3Q9UFD9 1639 aa47.1■■■■■ 5.13
PQLC1-214ENST00000593030 TARBP1Q13395 1621 aaKnown RBP47■■■■■ 5.11
PQLC1-214ENST00000593030 AQRO60306 1485 aaKnown RBP eCLIP46.99■■■■■ 5.116e-6■■■■□ 23.2
PQLC1-214ENST00000593030 ARHGEF11O15085 1522 aa46.96■■■■■ 5.11
PQLC1-214ENST00000593030 POLA1P09884 1462 aaPredicted RBP46.94■■■■■ 5.1
PQLC1-214ENST00000593030 RAD54L2Q9Y4B4 1467 aa46.78■■■■■ 5.08
PQLC1-214ENST00000593030 CHD1O14646 1710 aa46.74■■■■■ 5.07
PQLC1-214ENST00000593030 SOGA1O94964 1423 aa46.71■■■■■ 5.07
PQLC1-214ENST00000593030 FBLN2P98095 1184 aa46.7■■■■■ 5.07
PQLC1-214ENST00000593030 TDRD9Q8NDG6 1382 aaKnown RBP46.68■■■■■ 5.06
PQLC1-214ENST00000593030 CYB5RLQ6IPT4 315 aa46.65■■■■■ 5.06
PQLC1-214ENST00000593030 FGD5Q6ZNL6 1462 aa46.6■■■■■ 5.05
PQLC1-214ENST00000593030 CUX1P39880 1505 aa46.53■■■■■ 5.04
PQLC1-214ENST00000593030 ARAP1Q96P48 1450 aa46.51■■■■■ 5.04
PQLC1-214ENST00000593030 SNAPC4Q5SXM2 1469 aa46.49■■■■■ 5.03
PQLC1-214ENST00000593030 WDR97A6NE52 1622 aa46.47■■■■■ 5.03
PQLC1-214ENST00000593030 MAGI1Q96QZ7 1491 aaPredicted RBP46.33■■■■■ 5.01
PQLC1-214ENST00000593030 CHMP7Q8WUX9 453 aaPredicted RBP46.33■■■■■ 5.01
PQLC1-214ENST00000593030 GRIN2BQ13224 1484 aa46.32■■■■■ 5.01
PQLC1-214ENST00000593030 CLASP1Q7Z460 1538 aa46.29■■■■■ 5
PQLC1-214ENST00000593030 SYNJ1O43426 1573 aa46.21■■■■■ 4.99
PQLC1-214ENST00000593030 SYNJ2O15056 1496 aa46.2■■■■■ 4.99
PQLC1-214ENST00000593030 TRHP20396 242 aaPredicted RBP46.18■■■■■ 4.98
PQLC1-214ENST00000593030 GAPVD1Q14C86 1478 aa46.13■■■■■ 4.98
PQLC1-214ENST00000593030 SUPT5HO00267 1087 aaKnown RBP46.11■■■■■ 4.97
PQLC1-214ENST00000593030 ABCA10Q8WWZ4 1543 aa46.06■■■■■ 4.96
PQLC1-214ENST00000593030 PBRM1Q86U86 1689 aa46.04■■■■■ 4.96
PQLC1-214ENST00000593030 ABCA5Q8WWZ7 1642 aa45.98■■■■■ 4.95
PQLC1-214ENST00000593030 WRNQ14191 1432 aaPredicted RBP eCLIP45.83■■■■■ 4.93
PQLC1-214ENST00000593030 GRIN2AQ12879 1464 aa45.74■■■■■ 4.91
PQLC1-214ENST00000593030 TOP2BQ02880 1626 aa45.69■■■■■ 4.9
PQLC1-214ENST00000593030 BIVM-ERCC5R4GMW8 1640 aa45.68■■■■■ 4.9
PQLC1-214ENST00000593030 ADAMTS12P58397 1594 aa45.66■■■■■ 4.9
PQLC1-214ENST00000593030 NUP160Q12769 1436 aa45.61■■■■■ 4.89
PQLC1-214ENST00000593030 ERCC6L2Q5T890 1561 aa45.58■■■■■ 4.89
PQLC1-214ENST00000593030 CEP170Q5SW79 1584 aa45.57■■■■■ 4.89
PQLC1-214ENST00000593030 FHAD1B1AJZ9 1412 aa45.55■■■■■ 4.88
PQLC1-214ENST00000593030 ERICH3Q5RHP9 1530 aa45.46■■■■■ 4.87
PQLC1-214ENST00000593030 SHROOM2Q13796 1616 aa45.37■■■■■ 4.85
PQLC1-214ENST00000593030 PRG4Q92954 1404 aaPredicted RBP45.18■■■■■ 4.82
PQLC1-214ENST00000593030 JPH4Q96JJ6 628 aa45.14■■■■■ 4.82
PQLC1-214ENST00000593030 RUSC2Q8N2Y8 1516 aa45.02■■■■■ 4.8
PQLC1-214ENST00000593030 AEBP2Q6ZN18 517 aaPredicted RBP44.96■■■■■ 4.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms