RNA–Protein interactions for RNA: ENST00000334530.9

REEP4-202, Transcript of receptor accessory protein 4, humanhuman

TSL 1 (best) BASIC

Gene REEP4, Length 1,476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REEP4-202ENST00000334530 NISCHQ9Y2I1 1504 aa42.77■■■■■ 4.44
REEP4-202ENST00000334530 CCDC180Q9P1Z9 1646 aa38.22■■■■□ 3.71
REEP4-202ENST00000334530 ABCC9O60706 1549 aa37.8■■■■□ 3.64
REEP4-202ENST00000334530 RB1CC1Q8TDY2 1594 aa36.16■■■■□ 3.38
REEP4-202ENST00000334530 NACADO15069 1562 aa36.02■■■■□ 3.36
REEP4-202ENST00000334530 DCAF8L2P0C7V8 631 aa35.83■■■■□ 3.33
REEP4-202ENST00000334530 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
REEP4-202ENST00000334530 ZCCHC6Q5VYS8 1495 aaKnown RBP35.56■■■■□ 3.28
REEP4-202ENST00000334530 UNC13AQ9UPW8 1703 aa35.42■■■■□ 3.26
REEP4-202ENST00000334530 DCAF1Q9Y4B6 1507 aa35.37■■■■□ 3.25
REEP4-202ENST00000334530 PABPN1Q86U42 306 aaKnown RBP eCLIP35.22■■■■□ 3.23
REEP4-202ENST00000334530 BICRAQ9NZM4 1560 aa35.13■■■■□ 3.22
REEP4-202ENST00000334530 DNAJC5BQ9UF47 199 aa35.09■■■■□ 3.21
REEP4-202ENST00000334530 SCRIBQ14160 1630 aa34.85■■■■□ 3.17
REEP4-202ENST00000334530 SHROOM4Q9ULL8 1493 aa34.67■■■■□ 3.14
REEP4-202ENST00000334530 EIF4G1Q04637 1599 aaKnown RBP34.22■■■■□ 3.07
REEP4-202ENST00000334530 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
REEP4-202ENST00000334530 CECR2Q9BXF3 1484 aa34■■■■□ 3.03
REEP4-202ENST00000334530 SMARCA4P51532 1647 aa33.29■■■□□ 2.92
REEP4-202ENST00000334530 NCAPD3P42695 1498 aa33.24■■■□□ 2.91
REEP4-202ENST00000334530 ATAD2BQ9ULI0 1458 aa33.21■■■□□ 2.91
REEP4-202ENST00000334530 BAZ1AQ9NRL2 1556 aaPredicted RBP33.17■■■□□ 2.9
REEP4-202ENST00000334530 SMARCA2P51531 1590 aa33.13■■■□□ 2.89
REEP4-202ENST00000334530 HMGXB3Q12766 1538 aa33.05■■■□□ 2.88
REEP4-202ENST00000334530 PEG3Q9GZU2 1588 aa32.98■■■□□ 2.87
REEP4-202ENST00000334530 MROH2BQ7Z745 1585 aa32.97■■■□□ 2.87
REEP4-202ENST00000334530 BAZ1BQ9UIG0 1483 aaKnown RBP32.89■■■□□ 2.86
REEP4-202ENST00000334530 WIZO95785 1651 aa32.6■■■□□ 2.81
REEP4-202ENST00000334530 NESP48681 1621 aa32.6■■■□□ 2.81
REEP4-202ENST00000334530 ERCC6Q03468 1493 aa32.59■■■□□ 2.81
REEP4-202ENST00000334530 LAMC3Q9Y6N6 1575 aa32.44■■■□□ 2.78
REEP4-202ENST00000334530 RSF1Q96T23 1441 aaPredicted RBP32.42■■■□□ 2.78
REEP4-202ENST00000334530 CUX2O14529 1486 aa32.41■■■□□ 2.78
REEP4-202ENST00000334530 CADPSQ9ULU8 1353 aa32.24■■■□□ 2.75
REEP4-202ENST00000334530 THOC2Q8NI27 1593 aaKnown RBP32.22■■■□□ 2.75
REEP4-202ENST00000334530 KIF21AQ7Z4S6 1674 aa32.22■■■□□ 2.75
REEP4-202ENST00000334530 TOP2AP11388 1531 aaKnown RBP32.21■■■□□ 2.75
REEP4-202ENST00000334530 PDS5BQ9NTI5 1447 aa32.21■■■□□ 2.75
REEP4-202ENST00000334530 CFTRP13569 1480 aa31.98■■■□□ 2.71
REEP4-202ENST00000334530 MRC2Q9UBG0 1479 aa31.92■■■□□ 2.7
REEP4-202ENST00000334530 DNAJC5Q9H3Z4 198 aa31.91■■■□□ 2.7
REEP4-202ENST00000334530 FANCD2Q9BXW9 1451 aa31.88■■■□□ 2.69
REEP4-202ENST00000334530 CEP164Q9UPV0 1460 aa31.88■■■□□ 2.69
REEP4-202ENST00000334530 WDR62O43379 1518 aa31.86■■■□□ 2.69
REEP4-202ENST00000334530 CCDC88BA6NC98 1476 aa31.83■■■□□ 2.69
REEP4-202ENST00000334530 PRDM2Q13029 1718 aa31.74■■■□□ 2.67
REEP4-202ENST00000334530 URB2Q14146 1524 aaKnown RBP31.61■■■□□ 2.65
REEP4-202ENST00000334530 TOPBP1Q92547 1522 aa31.34■■■□□ 2.61
REEP4-202ENST00000334530 ABCC8Q09428 1581 aa31.27■■■□□ 2.6
REEP4-202ENST00000334530 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.59
REEP4-202ENST00000334530 SUPT5HO00267 1087 aaKnown RBP31.23■■■□□ 2.59
REEP4-202ENST00000334530 IFT140Q96RY7 1462 aa31.22■■■□□ 2.59
REEP4-202ENST00000334530 ZNF608Q9ULD9 1512 aaPredicted RBP31.16■■■□□ 2.58
REEP4-202ENST00000334530 TARBP1Q13395 1621 aaKnown RBP31.05■■■□□ 2.56
REEP4-202ENST00000334530 POLA1P09884 1462 aaPredicted RBP31.05■■■□□ 2.56
REEP4-202ENST00000334530 EIF4G3O43432 1585 aaKnown RBP31.02■■■□□ 2.56
REEP4-202ENST00000334530 CUX1P39880 1505 aa30.96■■■□□ 2.55
REEP4-202ENST00000334530 OSCARQ8IYS5 282 aa30.95■■■□□ 2.54
REEP4-202ENST00000334530 RAD54L2Q9Y4B4 1467 aa30.91■■■□□ 2.54
REEP4-202ENST00000334530 AQRO60306 1485 aaKnown RBP eCLIP30.9■■■□□ 2.541e-6■■■□□ 16.7
REEP4-202ENST00000334530 FGD5Q6ZNL6 1462 aa30.9■■■□□ 2.54
REEP4-202ENST00000334530 SOGA1O94964 1423 aa30.87■■■□□ 2.53
REEP4-202ENST00000334530 TDRD9Q8NDG6 1382 aaKnown RBP30.77■■■□□ 2.52
REEP4-202ENST00000334530 WDR97A6NE52 1622 aa30.75■■■□□ 2.51
REEP4-202ENST00000334530 CHD1O14646 1710 aa30.72■■■□□ 2.51
REEP4-202ENST00000334530 TRIM41Q8WV44 630 aa30.65■■■□□ 2.5
REEP4-202ENST00000334530 SNAPC4Q5SXM2 1469 aa30.61■■■□□ 2.49
REEP4-202ENST00000334530 ABCA10Q8WWZ4 1543 aa30.58■■■□□ 2.49
REEP4-202ENST00000334530 BIVM-ERCC5R4GMW8 1640 aa30.58■■■□□ 2.49
REEP4-202ENST00000334530 GRIN2BQ13224 1484 aa30.58■■■□□ 2.49
REEP4-202ENST00000334530 RIMBP3CA6NJZ7 1639 aa30.57■■■□□ 2.49
REEP4-202ENST00000334530 RIMBP3BA6NNM3 1639 aa30.57■■■□□ 2.49
REEP4-202ENST00000334530 RIMBP3Q9UFD9 1639 aa30.57■■■□□ 2.49
REEP4-202ENST00000334530 TOP2BQ02880 1626 aa30.57■■■□□ 2.48
REEP4-202ENST00000334530 FBLN2P98095 1184 aa30.57■■■□□ 2.48
REEP4-202ENST00000334530 WRNQ14191 1432 aaPredicted RBP eCLIP30.57■■■□□ 2.48
REEP4-202ENST00000334530 SYNJ1O43426 1573 aa30.55■■■□□ 2.48
REEP4-202ENST00000334530 MAGI1Q96QZ7 1491 aaPredicted RBP30.55■■■□□ 2.48
REEP4-202ENST00000334530 PBRM1Q86U86 1689 aa30.53■■■□□ 2.48
REEP4-202ENST00000334530 GAPVD1Q14C86 1478 aa30.52■■■□□ 2.48
REEP4-202ENST00000334530 ABCA5Q8WWZ7 1642 aa30.52■■■□□ 2.48
REEP4-202ENST00000334530 ARHGEF11O15085 1522 aa30.51■■■□□ 2.48
REEP4-202ENST00000334530 SYNJ2O15056 1496 aa30.43■■■□□ 2.46
REEP4-202ENST00000334530 CHMP7Q8WUX9 453 aaPredicted RBP30.41■■■□□ 2.46
REEP4-202ENST00000334530 CLASP1Q7Z460 1538 aa30.37■■■□□ 2.45
REEP4-202ENST00000334530 ADAMTS12P58397 1594 aa30.26■■■□□ 2.43
REEP4-202ENST00000334530 ARAP1Q96P48 1450 aa30.25■■■□□ 2.43
REEP4-202ENST00000334530 ERICH3Q5RHP9 1530 aa30.21■■■□□ 2.43
REEP4-202ENST00000334530 CYB5RLQ6IPT4 315 aa30.2■■■□□ 2.43
REEP4-202ENST00000334530 GRIN2AQ12879 1464 aa30.19■■■□□ 2.42
REEP4-202ENST00000334530 FHAD1B1AJZ9 1412 aa30.15■■■□□ 2.42
REEP4-202ENST00000334530 CEP170Q5SW79 1584 aa30.09■■■□□ 2.41
REEP4-202ENST00000334530 NUP160Q12769 1436 aa30.09■■■□□ 2.41
REEP4-202ENST00000334530 KIF27Q86VH2 1401 aa29.94■■■□□ 2.38
REEP4-202ENST00000334530 SHROOM2Q13796 1616 aa29.93■■■□□ 2.38
REEP4-202ENST00000334530 ERCC6L2Q5T890 1561 aa29.93■■■□□ 2.38
REEP4-202ENST00000334530 IGF1RP08069 1367 aa29.9■■■□□ 2.38
REEP4-202ENST00000334530 CUL7Q14999 1698 aa29.85■■■□□ 2.37
REEP4-202ENST00000334530 RUSC2Q8N2Y8 1516 aa29.83■■■□□ 2.37
REEP4-202ENST00000334530 JPH4Q96JJ6 628 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms