RNA–Protein interactions for RNA: ENST00000579180.2

MSI2-206, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MSI2, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-206ENST00000579180 NISCHQ9Y2I1 1504 aa36.3■■■■□ 3.4
MSI2-206ENST00000579180 CCDC180Q9P1Z9 1646 aa31.82■■■□□ 2.68
MSI2-206ENST00000579180 ZCCHC6Q5VYS8 1495 aaKnown RBP30.45■■■□□ 2.47
MSI2-206ENST00000579180 ABCC9O60706 1549 aa30.16■■■□□ 2.42
MSI2-206ENST00000579180 DCAF1Q9Y4B6 1507 aa30.05■■■□□ 2.4
MSI2-206ENST00000579180 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
MSI2-206ENST00000579180 MYO15BQ96JP2 1530 aa29.78■■■□□ 2.36
MSI2-206ENST00000579180 NACADO15069 1562 aa29.64■■■□□ 2.33
MSI2-206ENST00000579180 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
MSI2-206ENST00000579180 SHROOM4Q9ULL8 1493 aa29.35■■■□□ 2.29
MSI2-206ENST00000579180 SCRIBQ14160 1630 aa29.15■■■□□ 2.26
MSI2-206ENST00000579180 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
MSI2-206ENST00000579180 BICRAQ9NZM4 1560 aa28.57■■■□□ 2.16
MSI2-206ENST00000579180 PABPN1Q86U42 306 aaKnown RBP eCLIP28.36■■■□□ 2.13
MSI2-206ENST00000579180 CECR2Q9BXF3 1484 aa28.2■■■□□ 2.11
MSI2-206ENST00000579180 SUPT5HO00267 1087 aaKnown RBP28.12■■■□□ 2.09
MSI2-206ENST00000579180 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
MSI2-206ENST00000579180 BAZ1AQ9NRL2 1556 aaPredicted RBP28.04■■■□□ 2.08
MSI2-206ENST00000579180 MROH2BQ7Z745 1585 aa28.02■■■□□ 2.08
MSI2-206ENST00000579180 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
MSI2-206ENST00000579180 WIZO95785 1651 aa27.81■■■□□ 2.04
MSI2-206ENST00000579180 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.02
MSI2-206ENST00000579180 PEG3Q9GZU2 1588 aa27.66■■■□□ 2.02
MSI2-206ENST00000579180 ATAD2BQ9ULI0 1458 aa27.53■■■□□ 2
MSI2-206ENST00000579180 SMARCA2P51531 1590 aa27.52■■■□□ 2
MSI2-206ENST00000579180 TOP2AP11388 1531 aaKnown RBP27.51■■□□□ 1.99
MSI2-206ENST00000579180 CC2D2AQ9P2K1 1620 aa27.35■■□□□ 1.97
MSI2-206ENST00000579180 NCAPD3P42695 1498 aa27.34■■□□□ 1.97
MSI2-206ENST00000579180 BAZ1BQ9UIG0 1483 aaKnown RBP27.34■■□□□ 1.97
MSI2-206ENST00000579180 HMGXB3Q12766 1538 aa27.3■■□□□ 1.96
MSI2-206ENST00000579180 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.95
MSI2-206ENST00000579180 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
MSI2-206ENST00000579180 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
MSI2-206ENST00000579180 CFTRP13569 1480 aa26.67■■□□□ 1.86
MSI2-206ENST00000579180 PRDM2Q13029 1718 aa26.62■■□□□ 1.85
MSI2-206ENST00000579180 CADPSQ9ULU8 1353 aa26.6■■□□□ 1.85
MSI2-206ENST00000579180 ABCC8Q09428 1581 aa26.56■■□□□ 1.84
MSI2-206ENST00000579180 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
MSI2-206ENST00000579180 LAMC3Q9Y6N6 1575 aa26.46■■□□□ 1.83
MSI2-206ENST00000579180 NESP48681 1621 aa26.43■■□□□ 1.82
MSI2-206ENST00000579180 WRNQ14191 1432 aaPredicted RBP eCLIP26.4■■□□□ 1.82
MSI2-206ENST00000579180 SYNJ1O43426 1573 aa26.34■■□□□ 1.81
MSI2-206ENST00000579180 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
MSI2-206ENST00000579180 TOP2BQ02880 1626 aa26.26■■□□□ 1.79
MSI2-206ENST00000579180 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
MSI2-206ENST00000579180 CUX1P39880 1505 aa26.22■■□□□ 1.79
MSI2-206ENST00000579180 PDS5BQ9NTI5 1447 aa26.21■■□□□ 1.79
MSI2-206ENST00000579180 KIF21AQ7Z4S6 1674 aa26.18■■□□□ 1.78
MSI2-206ENST00000579180 CEP164Q9UPV0 1460 aa26.15■■□□□ 1.78
MSI2-206ENST00000579180 DNMBPQ6XZF7 1577 aa26.06■■□□□ 1.76
MSI2-206ENST00000579180 TOPBP1Q92547 1522 aa26.02■■□□□ 1.76
MSI2-206ENST00000579180 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.75
MSI2-206ENST00000579180 SOGA1O94964 1423 aa26■■□□□ 1.75
MSI2-206ENST00000579180 FGD5Q6ZNL6 1462 aa25.96■■□□□ 1.75
MSI2-206ENST00000579180 FAM9AQ8IZU1 332 aaPredicted RBP25.96■■□□□ 1.75
MSI2-206ENST00000579180 RUSC2Q8N2Y8 1516 aa25.93■■□□□ 1.74
MSI2-206ENST00000579180 EEA1Q15075 1411 aa25.92■■□□□ 1.74
MSI2-206ENST00000579180 MRC2Q9UBG0 1479 aa25.9■■□□□ 1.74
MSI2-206ENST00000579180 POLA1P09884 1462 aaPredicted RBP25.87■■□□□ 1.73
MSI2-206ENST00000579180 ERCC6Q03468 1493 aa25.86■■□□□ 1.73
MSI2-206ENST00000579180 WDR62O43379 1518 aa25.81■■□□□ 1.72
MSI2-206ENST00000579180 LOC105371045A0A1W2PR82 267 aa25.8■■□□□ 1.72
MSI2-206ENST00000579180 THOC2Q8NI27 1593 aaKnown RBP25.79■■□□□ 1.72
MSI2-206ENST00000579180 CSRNP3Q8WYN3 585 aa25.77■■□□□ 1.72
MSI2-206ENST00000579180 RAD54L2Q9Y4B4 1467 aa25.76■■□□□ 1.71
MSI2-206ENST00000579180 KIF27Q86VH2 1401 aa25.74■■□□□ 1.71
MSI2-206ENST00000579180 ABCA10Q8WWZ4 1543 aa25.73■■□□□ 1.71
MSI2-206ENST00000579180 WDR97A6NE52 1622 aa25.73■■□□□ 1.71
MSI2-206ENST00000579180 CUX2O14529 1486 aa25.72■■□□□ 1.71
MSI2-206ENST00000579180 TARBP1Q13395 1621 aaKnown RBP25.68■■□□□ 1.7
MSI2-206ENST00000579180 KIF21BO75037 1637 aa25.63■■□□□ 1.69
MSI2-206ENST00000579180 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
MSI2-206ENST00000579180 IFT140Q96RY7 1462 aa25.56■■□□□ 1.68
MSI2-206ENST00000579180 EHMT2Q96KQ7 1210 aa25.55■■□□□ 1.68
MSI2-206ENST00000579180 IGF1RP08069 1367 aa25.55■■□□□ 1.68
MSI2-206ENST00000579180 PRXQ9BXM0 1461 aa25.55■■□□□ 1.68
MSI2-206ENST00000579180 GOLGA3Q08378 1498 aa25.54■■□□□ 1.68
MSI2-206ENST00000579180 TDRD9Q8NDG6 1382 aaKnown RBP25.5■■□□□ 1.67
MSI2-206ENST00000579180 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
MSI2-206ENST00000579180 RAPGEF2Q9Y4G8 1499 aa25.49■■□□□ 1.67
MSI2-206ENST00000579180 GAPVD1Q14C86 1478 aa25.48■■□□□ 1.67
MSI2-206ENST00000579180 CUL7Q14999 1698 aa25.42■■□□□ 1.66
MSI2-206ENST00000579180 TNIKQ9UKE5 1360 aa25.42■■□□□ 1.66
MSI2-206ENST00000579180 ZNF608Q9ULD9 1512 aaPredicted RBP25.42■■□□□ 1.66
MSI2-206ENST00000579180 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
MSI2-206ENST00000579180 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.662e-6■■■■■ 26.9
MSI2-206ENST00000579180 CARMIL1Q5VZK9 1371 aa25.4■■□□□ 1.66
MSI2-206ENST00000579180 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
MSI2-206ENST00000579180 EIF4G3O43432 1585 aaKnown RBP25.36■■□□□ 1.65
MSI2-206ENST00000579180 GRIN2BQ13224 1484 aa25.31■■□□□ 1.64
MSI2-206ENST00000579180 CEP162Q5TB80 1403 aa25.25■■□□□ 1.63
MSI2-206ENST00000579180 ADAMTS12P58397 1594 aa25.24■■□□□ 1.63
MSI2-206ENST00000579180 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.63
MSI2-206ENST00000579180 SNAPC4Q5SXM2 1469 aa25.17■■□□□ 1.62
MSI2-206ENST00000579180 MAGI1Q96QZ7 1491 aaPredicted RBP25.14■■□□□ 1.62
MSI2-206ENST00000579180 CTTNBP2Q8WZ74 1663 aa25.13■■□□□ 1.61
MSI2-206ENST00000579180 CLIP1P30622 1438 aa25.11■■□□□ 1.61
MSI2-206ENST00000579180 SYNJ2O15056 1496 aa25.03■■□□□ 1.6
MSI2-206ENST00000579180 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
MSI2-206ENST00000579180 RANGAP1P46060 587 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms