RNA–Protein interactions for RNA: ENST00000628569.1

RAB5B-211, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB5B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-211ENST00000628569 NISCHQ9Y2I1 1504 aa29.54■■■□□ 2.32
RAB5B-211ENST00000628569 CCDC180Q9P1Z9 1646 aa25.86■■□□□ 1.73
RAB5B-211ENST00000628569 ZCCHC6Q5VYS8 1495 aaKnown RBP24.85■■□□□ 1.57
RAB5B-211ENST00000628569 DCAF1Q9Y4B6 1507 aa24.55■■□□□ 1.52
RAB5B-211ENST00000628569 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
RAB5B-211ENST00000628569 ABCC9O60706 1549 aa24.16■■□□□ 1.46
RAB5B-211ENST00000628569 DCAF8L2P0C7V8 631 aa24.03■■□□□ 1.44
RAB5B-211ENST00000628569 NACADO15069 1562 aa24.01■■□□□ 1.43
RAB5B-211ENST00000628569 SHROOM4Q9ULL8 1493 aa23.84■■□□□ 1.41
RAB5B-211ENST00000628569 RB1CC1Q8TDY2 1594 aa23.77■■□□□ 1.4
RAB5B-211ENST00000628569 DNAJC5BQ9UF47 199 aa23.71■■□□□ 1.39
RAB5B-211ENST00000628569 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
RAB5B-211ENST00000628569 UNC13AQ9UPW8 1703 aa23.32■■□□□ 1.32
RAB5B-211ENST00000628569 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
RAB5B-211ENST00000628569 SUPT5HO00267 1087 aaKnown RBP22.94■■□□□ 1.26
RAB5B-211ENST00000628569 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
RAB5B-211ENST00000628569 CECR2Q9BXF3 1484 aa22.86■■□□□ 1.25
RAB5B-211ENST00000628569 BAZ1AQ9NRL2 1556 aaPredicted RBP22.82■■□□□ 1.24
RAB5B-211ENST00000628569 MROH2BQ7Z745 1585 aa22.77■■□□□ 1.24
RAB5B-211ENST00000628569 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
RAB5B-211ENST00000628569 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
RAB5B-211ENST00000628569 WIZO95785 1651 aa22.59■■□□□ 1.21
RAB5B-211ENST00000628569 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
RAB5B-211ENST00000628569 DNAJC5Q9H3Z4 198 aa22.51■■□□□ 1.19
RAB5B-211ENST00000628569 TOP2AP11388 1531 aaKnown RBP22.42■■□□□ 1.18
RAB5B-211ENST00000628569 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.16
RAB5B-211ENST00000628569 SMARCA2P51531 1590 aa22.32■■□□□ 1.16
RAB5B-211ENST00000628569 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
RAB5B-211ENST00000628569 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
RAB5B-211ENST00000628569 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.13
RAB5B-211ENST00000628569 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
RAB5B-211ENST00000628569 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
RAB5B-211ENST00000628569 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
RAB5B-211ENST00000628569 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
RAB5B-211ENST00000628569 TRIM41Q8WV44 630 aa21.65■■□□□ 1.06
RAB5B-211ENST00000628569 PRDM2Q13029 1718 aa21.64■■□□□ 1.06
RAB5B-211ENST00000628569 CFTRP13569 1480 aa21.64■■□□□ 1.05
RAB5B-211ENST00000628569 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
RAB5B-211ENST00000628569 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
RAB5B-211ENST00000628569 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
RAB5B-211ENST00000628569 SYNJ1O43426 1573 aa21.46■■□□□ 1.03
RAB5B-211ENST00000628569 BIVM-ERCC5R4GMW8 1640 aa21.44■■□□□ 1.02
RAB5B-211ENST00000628569 TOP2BQ02880 1626 aa21.42■■□□□ 1.02
RAB5B-211ENST00000628569 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
RAB5B-211ENST00000628569 EEA1Q15075 1411 aa21.3■■□□□ 1
RAB5B-211ENST00000628569 CUX1P39880 1505 aa21.3■■□□□ 1
RAB5B-211ENST00000628569 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
RAB5B-211ENST00000628569 NESP48681 1621 aa21.25■□□□□ 0.99
RAB5B-211ENST00000628569 SOGA1O94964 1423 aa21.21■□□□□ 0.99
RAB5B-211ENST00000628569 LOC105371045A0A1W2PR82 267 aa21.15■□□□□ 0.98
RAB5B-211ENST00000628569 DNMBPQ6XZF7 1577 aa21.14■□□□□ 0.98
RAB5B-211ENST00000628569 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.98
RAB5B-211ENST00000628569 FAM9AQ8IZU1 332 aaPredicted RBP21.14■□□□□ 0.97
RAB5B-211ENST00000628569 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
RAB5B-211ENST00000628569 RUSC2Q8N2Y8 1516 aa21.13■□□□□ 0.97
RAB5B-211ENST00000628569 CUX2O14529 1486 aa21.12■□□□□ 0.97
RAB5B-211ENST00000628569 KIF21AQ7Z4S6 1674 aa21.09■□□□□ 0.97
RAB5B-211ENST00000628569 TOPBP1Q92547 1522 aa21.06■□□□□ 0.96
RAB5B-211ENST00000628569 KIF21BO75037 1637 aa21.05■□□□□ 0.96
RAB5B-211ENST00000628569 CSRNP3Q8WYN3 585 aa21.05■□□□□ 0.96
RAB5B-211ENST00000628569 FGD5Q6ZNL6 1462 aa21.05■□□□□ 0.96
RAB5B-211ENST00000628569 URB2Q14146 1524 aaKnown RBP21.01■□□□□ 0.95
RAB5B-211ENST00000628569 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
RAB5B-211ENST00000628569 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
RAB5B-211ENST00000628569 GOLGA3Q08378 1498 aa20.95■□□□□ 0.94
RAB5B-211ENST00000628569 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
RAB5B-211ENST00000628569 WDR97A6NE52 1622 aa20.92■□□□□ 0.94
RAB5B-211ENST00000628569 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
RAB5B-211ENST00000628569 MRC2Q9UBG0 1479 aa20.9■□□□□ 0.94
RAB5B-211ENST00000628569 TNIKQ9UKE5 1360 aa20.9■□□□□ 0.94
RAB5B-211ENST00000628569 PRXQ9BXM0 1461 aa20.89■□□□□ 0.94
RAB5B-211ENST00000628569 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
RAB5B-211ENST00000628569 WDR62O43379 1518 aa20.84■□□□□ 0.93
RAB5B-211ENST00000628569 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
RAB5B-211ENST00000628569 RAPGEF2Q9Y4G8 1499 aa20.81■□□□□ 0.92
RAB5B-211ENST00000628569 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
RAB5B-211ENST00000628569 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
RAB5B-211ENST00000628569 THOC2Q8NI27 1593 aaKnown RBP20.77■□□□□ 0.92
RAB5B-211ENST00000628569 IGF1RP08069 1367 aa20.77■□□□□ 0.92
RAB5B-211ENST00000628569 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
RAB5B-211ENST00000628569 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
RAB5B-211ENST00000628569 CUL7Q14999 1698 aa20.72■□□□□ 0.91
RAB5B-211ENST00000628569 UBTFP17480 764 aaKnown RBP20.68■□□□□ 0.9
RAB5B-211ENST00000628569 IFT140Q96RY7 1462 aa20.66■□□□□ 0.9
RAB5B-211ENST00000628569 CARMIL1Q5VZK9 1371 aa20.64■□□□□ 0.89
RAB5B-211ENST00000628569 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
RAB5B-211ENST00000628569 PBRM1Q86U86 1689 aa20.6■□□□□ 0.89
RAB5B-211ENST00000628569 CLIP1P30622 1438 aa20.57■□□□□ 0.88
RAB5B-211ENST00000628569 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
RAB5B-211ENST00000628569 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
RAB5B-211ENST00000628569 CTTNBP2Q8WZ74 1663 aa20.49■□□□□ 0.87
RAB5B-211ENST00000628569 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
RAB5B-211ENST00000628569 ADAMTS12P58397 1594 aa20.48■□□□□ 0.87
RAB5B-211ENST00000628569 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
RAB5B-211ENST00000628569 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.877e-8■■■■■ 33.4
RAB5B-211ENST00000628569 VPS8Q8N3P4 1428 aa20.44■□□□□ 0.86
RAB5B-211ENST00000628569 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
RAB5B-211ENST00000628569 ARAP1Q96P48 1450 aa20.42■□□□□ 0.86
RAB5B-211ENST00000628569 ARHGAP35Q9NRY4 1499 aa20.41■□□□□ 0.86
RAB5B-211ENST00000628569 EFCAB5A4FU69 1503 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms