RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
RAB5B-202ENST00000448789 CCDC180Q9P1Z9 1646 aa30.31■■■□□ 2.44
RAB5B-202ENST00000448789 ZCCHC6Q5VYS8 1495 aaKnown RBP29.14■■■□□ 2.26
RAB5B-202ENST00000448789 ABCC9O60706 1549 aa28.9■■■□□ 2.22
RAB5B-202ENST00000448789 DCAF8L2P0C7V8 631 aa28.68■■■□□ 2.18
RAB5B-202ENST00000448789 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
RAB5B-202ENST00000448789 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
RAB5B-202ENST00000448789 NACADO15069 1562 aa28.27■■■□□ 2.12
RAB5B-202ENST00000448789 SHROOM4Q9ULL8 1493 aa28.22■■■□□ 2.11
RAB5B-202ENST00000448789 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
RAB5B-202ENST00000448789 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
RAB5B-202ENST00000448789 UNC13AQ9UPW8 1703 aa27.54■■■□□ 2
RAB5B-202ENST00000448789 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
RAB5B-202ENST00000448789 PABPN1Q86U42 306 aaKnown RBP eCLIP27.21■■□□□ 1.95
RAB5B-202ENST00000448789 CECR2Q9BXF3 1484 aa27.04■■□□□ 1.92
RAB5B-202ENST00000448789 SUPT5HO00267 1087 aaKnown RBP27■■□□□ 1.91
RAB5B-202ENST00000448789 RSF1Q96T23 1441 aaPredicted RBP26.86■■□□□ 1.89
RAB5B-202ENST00000448789 MROH2BQ7Z745 1585 aa26.84■■□□□ 1.89
RAB5B-202ENST00000448789 BAZ1AQ9NRL2 1556 aaPredicted RBP26.79■■□□□ 1.88
RAB5B-202ENST00000448789 SMARCA4P51532 1647 aa26.73■■□□□ 1.87
RAB5B-202ENST00000448789 WIZO95785 1651 aa26.6■■□□□ 1.85
RAB5B-202ENST00000448789 EIF4G1Q04637 1599 aaKnown RBP26.47■■□□□ 1.83
RAB5B-202ENST00000448789 PEG3Q9GZU2 1588 aa26.39■■□□□ 1.81
RAB5B-202ENST00000448789 ATAD2BQ9ULI0 1458 aa26.34■■□□□ 1.81
RAB5B-202ENST00000448789 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
RAB5B-202ENST00000448789 SMARCA2P51531 1590 aa26.27■■□□□ 1.8
RAB5B-202ENST00000448789 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
RAB5B-202ENST00000448789 CC2D2AQ9P2K1 1620 aa26.12■■□□□ 1.77
RAB5B-202ENST00000448789 NCAPD3P42695 1498 aa26.12■■□□□ 1.77
RAB5B-202ENST00000448789 HMGXB3Q12766 1538 aa26.07■■□□□ 1.76
RAB5B-202ENST00000448789 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
RAB5B-202ENST00000448789 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
RAB5B-202ENST00000448789 DNAJC5BQ9UF47 199 aa25.68■■□□□ 1.7
RAB5B-202ENST00000448789 CFTRP13569 1480 aa25.49■■□□□ 1.67
RAB5B-202ENST00000448789 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
RAB5B-202ENST00000448789 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
RAB5B-202ENST00000448789 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
RAB5B-202ENST00000448789 NESP48681 1621 aa25.34■■□□□ 1.65
RAB5B-202ENST00000448789 PRDM2Q13029 1718 aa25.31■■□□□ 1.64
RAB5B-202ENST00000448789 WRNQ14191 1432 aaPredicted RBP eCLIP25.27■■□□□ 1.64
RAB5B-202ENST00000448789 LAMC3Q9Y6N6 1575 aa25.24■■□□□ 1.63
RAB5B-202ENST00000448789 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
RAB5B-202ENST00000448789 FANCD2Q9BXW9 1451 aa25.17■■□□□ 1.62
RAB5B-202ENST00000448789 CUX1P39880 1505 aa25.11■■□□□ 1.61
RAB5B-202ENST00000448789 TOP2BQ02880 1626 aa25.09■■□□□ 1.61
RAB5B-202ENST00000448789 BIVM-ERCC5R4GMW8 1640 aa25.07■■□□□ 1.6
RAB5B-202ENST00000448789 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
RAB5B-202ENST00000448789 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
RAB5B-202ENST00000448789 KIF21AQ7Z4S6 1674 aa24.99■■□□□ 1.59
RAB5B-202ENST00000448789 FAM9AQ8IZU1 332 aaPredicted RBP24.96■■□□□ 1.59
RAB5B-202ENST00000448789 SOGA1O94964 1423 aa24.93■■□□□ 1.58
RAB5B-202ENST00000448789 DNMBPQ6XZF7 1577 aa24.9■■□□□ 1.58
RAB5B-202ENST00000448789 URB2Q14146 1524 aaKnown RBP24.9■■□□□ 1.58
RAB5B-202ENST00000448789 TOPBP1Q92547 1522 aa24.88■■□□□ 1.57
RAB5B-202ENST00000448789 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
RAB5B-202ENST00000448789 FGD5Q6ZNL6 1462 aa24.85■■□□□ 1.57
RAB5B-202ENST00000448789 LOC105371045A0A1W2PR82 267 aa24.78■■□□□ 1.56
RAB5B-202ENST00000448789 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
RAB5B-202ENST00000448789 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
RAB5B-202ENST00000448789 EEA1Q15075 1411 aa24.75■■□□□ 1.55
RAB5B-202ENST00000448789 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
RAB5B-202ENST00000448789 RAD54L2Q9Y4B4 1467 aa24.69■■□□□ 1.54
RAB5B-202ENST00000448789 CSRNP3Q8WYN3 585 aa24.66■■□□□ 1.54
RAB5B-202ENST00000448789 WDR62O43379 1518 aa24.65■■□□□ 1.54
RAB5B-202ENST00000448789 THOC2Q8NI27 1593 aaKnown RBP24.65■■□□□ 1.54
RAB5B-202ENST00000448789 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.53
RAB5B-202ENST00000448789 CUX2O14529 1486 aa24.64■■□□□ 1.53
RAB5B-202ENST00000448789 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
RAB5B-202ENST00000448789 ABCA10Q8WWZ4 1543 aa24.6■■□□□ 1.53
RAB5B-202ENST00000448789 WDR97A6NE52 1622 aa24.57■■□□□ 1.52
RAB5B-202ENST00000448789 TARBP1Q13395 1621 aaKnown RBP24.54■■□□□ 1.52
RAB5B-202ENST00000448789 KIF21BO75037 1637 aa24.49■■□□□ 1.51
RAB5B-202ENST00000448789 IGF1RP08069 1367 aa24.45■■□□□ 1.5
RAB5B-202ENST00000448789 GOLGA3Q08378 1498 aa24.45■■□□□ 1.5
RAB5B-202ENST00000448789 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
RAB5B-202ENST00000448789 ABCA5Q8WWZ7 1642 aa24.44■■□□□ 1.5
RAB5B-202ENST00000448789 PRXQ9BXM0 1461 aa24.44■■□□□ 1.5
RAB5B-202ENST00000448789 RAPGEF2Q9Y4G8 1499 aa24.43■■□□□ 1.5
RAB5B-202ENST00000448789 IFT140Q96RY7 1462 aa24.41■■□□□ 1.5
RAB5B-202ENST00000448789 GAPVD1Q14C86 1478 aa24.37■■□□□ 1.49
RAB5B-202ENST00000448789 ERICH3Q5RHP9 1530 aa24.35■■□□□ 1.49
RAB5B-202ENST00000448789 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
RAB5B-202ENST00000448789 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.487e-8■■■■■ 33.4
RAB5B-202ENST00000448789 TNIKQ9UKE5 1360 aa24.32■■□□□ 1.48
RAB5B-202ENST00000448789 UBTFP17480 764 aaKnown RBP24.31■■□□□ 1.48
RAB5B-202ENST00000448789 CARMIL1Q5VZK9 1371 aa24.31■■□□□ 1.48
RAB5B-202ENST00000448789 CUL7Q14999 1698 aa24.25■■□□□ 1.47
RAB5B-202ENST00000448789 PBRM1Q86U86 1689 aa24.25■■□□□ 1.47
RAB5B-202ENST00000448789 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
RAB5B-202ENST00000448789 CEP162Q5TB80 1403 aa24.21■■□□□ 1.47
RAB5B-202ENST00000448789 GRIN2BQ13224 1484 aa24.2■■□□□ 1.47
RAB5B-202ENST00000448789 ADAMTS12P58397 1594 aa24.14■■□□□ 1.46
RAB5B-202ENST00000448789 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
RAB5B-202ENST00000448789 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
RAB5B-202ENST00000448789 CLIP1P30622 1438 aa24.06■■□□□ 1.44
RAB5B-202ENST00000448789 RANGAP1P46060 587 aaPredicted RBP24.03■■□□□ 1.44
RAB5B-202ENST00000448789 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
RAB5B-202ENST00000448789 CTTNBP2Q8WZ74 1663 aa23.96■■□□□ 1.43
RAB5B-202ENST00000448789 SYNJ2O15056 1496 aa23.93■■□□□ 1.42
RAB5B-202ENST00000448789 GRIN2AQ12879 1464 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms