RNA–Protein interactions for RNA: ENST00000527344.5

CFL1-206, Transcript of cofilin 1, humanhuman

TSL 2 BASIC

Gene CFL1, Length 962 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-206ENST00000527344 NISCHQ9Y2I1 1504 aa35.2■■■■□ 3.23
CFL1-206ENST00000527344 ABCC9O60706 1549 aa32■■■□□ 2.71
CFL1-206ENST00000527344 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
CFL1-206ENST00000527344 DNAJC5BQ9UF47 199 aa30.33■■■□□ 2.45
CFL1-206ENST00000527344 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
CFL1-206ENST00000527344 NACADO15069 1562 aa29.97■■■□□ 2.39
CFL1-206ENST00000527344 DCAF8L2P0C7V8 631 aa29.83■■■□□ 2.37
CFL1-206ENST00000527344 PABPN1Q86U42 306 aaKnown RBP eCLIP29.77■■■□□ 2.36
CFL1-206ENST00000527344 UNC13AQ9UPW8 1703 aa29.7■■■□□ 2.34
CFL1-206ENST00000527344 BICRAQ9NZM4 1560 aa29.49■■■□□ 2.31
CFL1-206ENST00000527344 MYO15BQ96JP2 1530 aa29.43■■■□□ 2.3
CFL1-206ENST00000527344 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
CFL1-206ENST00000527344 DCAF1Q9Y4B6 1507 aa28.99■■■□□ 2.23
CFL1-206ENST00000527344 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
CFL1-206ENST00000527344 CC2D2AQ9P2K1 1620 aa28.87■■■□□ 2.21
CFL1-206ENST00000527344 SHROOM4Q9ULL8 1493 aa28.86■■■□□ 2.21
CFL1-206ENST00000527344 CECR2Q9BXF3 1484 aa28.8■■■□□ 2.2
CFL1-206ENST00000527344 EIF4G1Q04637 1599 aaKnown RBP28.73■■■□□ 2.19
CFL1-206ENST00000527344 DNAJC5Q9H3Z4 198 aa27.91■■■□□ 2.06
CFL1-206ENST00000527344 NCAPD3P42695 1498 aa27.7■■■□□ 2.02
CFL1-206ENST00000527344 ATAD2BQ9ULI0 1458 aa27.61■■■□□ 2.01
CFL1-206ENST00000527344 CUX2O14529 1486 aa27.57■■■□□ 2
CFL1-206ENST00000527344 ERCC6Q03468 1493 aa27.56■■■□□ 2
CFL1-206ENST00000527344 SMARCA4P51532 1647 aa27.52■■■□□ 2
CFL1-206ENST00000527344 NESP48681 1621 aa27.45■■□□□ 1.99
CFL1-206ENST00000527344 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
CFL1-206ENST00000527344 HMGXB3Q12766 1538 aa27.45■■□□□ 1.98
CFL1-206ENST00000527344 BAZ1BQ9UIG0 1483 aaKnown RBP27.29■■□□□ 1.96
CFL1-206ENST00000527344 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
CFL1-206ENST00000527344 PEG3Q9GZU2 1588 aa27.22■■□□□ 1.95
CFL1-206ENST00000527344 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
CFL1-206ENST00000527344 THOC2Q8NI27 1593 aaKnown RBP27.18■■□□□ 1.94
CFL1-206ENST00000527344 LAMC3Q9Y6N6 1575 aa27.09■■□□□ 1.93
CFL1-206ENST00000527344 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
CFL1-206ENST00000527344 PDS5BQ9NTI5 1447 aa26.91■■□□□ 1.9
CFL1-206ENST00000527344 WIZO95785 1651 aa26.85■■□□□ 1.89
CFL1-206ENST00000527344 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
CFL1-206ENST00000527344 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
CFL1-206ENST00000527344 WDR62O43379 1518 aa26.7■■□□□ 1.87
CFL1-206ENST00000527344 TRIM41Q8WV44 630 aa26.62■■□□□ 1.85
CFL1-206ENST00000527344 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.85
CFL1-206ENST00000527344 FANCD2Q9BXW9 1451 aa26.55■■□□□ 1.84
CFL1-206ENST00000527344 CFTRP13569 1480 aa26.49■■□□□ 1.83
CFL1-206ENST00000527344 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
CFL1-206ENST00000527344 TOP2AP11388 1531 aaKnown RBP26.41■■□□□ 1.82
CFL1-206ENST00000527344 URB2Q14146 1524 aaKnown RBP26.4■■□□□ 1.82
CFL1-206ENST00000527344 OSCARQ8IYS5 282 aa26.27■■□□□ 1.8
CFL1-206ENST00000527344 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
CFL1-206ENST00000527344 CCDC88BA6NC98 1476 aa26.16■■□□□ 1.78
CFL1-206ENST00000527344 ZNF608Q9ULD9 1512 aaPredicted RBP26.14■■□□□ 1.78
CFL1-206ENST00000527344 RIMBP3CA6NJZ7 1639 aa26.06■■□□□ 1.76
CFL1-206ENST00000527344 RIMBP3BA6NNM3 1639 aa26.06■■□□□ 1.76
CFL1-206ENST00000527344 RIMBP3Q9UFD9 1639 aa26.06■■□□□ 1.76
CFL1-206ENST00000527344 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
CFL1-206ENST00000527344 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
CFL1-206ENST00000527344 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.74
CFL1-206ENST00000527344 ARHGEF11O15085 1522 aa25.93■■□□□ 1.74
CFL1-206ENST00000527344 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
CFL1-206ENST00000527344 ABCC8Q09428 1581 aa25.86■■□□□ 1.73
CFL1-206ENST00000527344 TARBP1Q13395 1621 aaKnown RBP25.85■■□□□ 1.73
CFL1-206ENST00000527344 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.737e-13■■■□□ 15.6
CFL1-206ENST00000527344 CHD1O14646 1710 aa25.83■■□□□ 1.72
CFL1-206ENST00000527344 POLA1P09884 1462 aaPredicted RBP25.76■■□□□ 1.71
CFL1-206ENST00000527344 CYB5RLQ6IPT4 315 aa25.75■■□□□ 1.71
CFL1-206ENST00000527344 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
CFL1-206ENST00000527344 FBLN2P98095 1184 aa25.68■■□□□ 1.7
CFL1-206ENST00000527344 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
CFL1-206ENST00000527344 TDRD9Q8NDG6 1382 aaKnown RBP25.65■■□□□ 1.7
CFL1-206ENST00000527344 SOGA1O94964 1423 aa25.62■■□□□ 1.69
CFL1-206ENST00000527344 FGD5Q6ZNL6 1462 aa25.57■■□□□ 1.68
CFL1-206ENST00000527344 SNAPC4Q5SXM2 1469 aa25.55■■□□□ 1.68
CFL1-206ENST00000527344 CUX1P39880 1505 aa25.53■■□□□ 1.68
CFL1-206ENST00000527344 TRHP20396 242 aaPredicted RBP25.51■■□□□ 1.67
CFL1-206ENST00000527344 CLASP1Q7Z460 1538 aa25.5■■□□□ 1.67
CFL1-206ENST00000527344 WDR97A6NE52 1622 aa25.44■■□□□ 1.66
CFL1-206ENST00000527344 CHMP7Q8WUX9 453 aaPredicted RBP25.41■■□□□ 1.66
CFL1-206ENST00000527344 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
CFL1-206ENST00000527344 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
CFL1-206ENST00000527344 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
CFL1-206ENST00000527344 PBRM1Q86U86 1689 aa25.35■■□□□ 1.65
CFL1-206ENST00000527344 SYNJ2O15056 1496 aa25.34■■□□□ 1.65
CFL1-206ENST00000527344 GAPVD1Q14C86 1478 aa25.29■■□□□ 1.64
CFL1-206ENST00000527344 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
CFL1-206ENST00000527344 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
CFL1-206ENST00000527344 ERCC6L2Q5T890 1561 aa25.17■■□□□ 1.62
CFL1-206ENST00000527344 SUPT5HO00267 1087 aaKnown RBP25.14■■□□□ 1.62
CFL1-206ENST00000527344 GRIN2AQ12879 1464 aa25.1■■□□□ 1.61
CFL1-206ENST00000527344 ADAMTS12P58397 1594 aa25.08■■□□□ 1.61
CFL1-206ENST00000527344 CEP170Q5SW79 1584 aa25.08■■□□□ 1.61
CFL1-206ENST00000527344 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
CFL1-206ENST00000527344 BIVM-ERCC5R4GMW8 1640 aa25.02■■□□□ 1.6
CFL1-206ENST00000527344 NUP160Q12769 1436 aa25.02■■□□□ 1.6
CFL1-206ENST00000527344 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
CFL1-206ENST00000527344 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
CFL1-206ENST00000527344 FHAD1B1AJZ9 1412 aa24.94■■□□□ 1.58
CFL1-206ENST00000527344 AEBP2Q6ZN18 517 aaPredicted RBP24.9■■□□□ 1.58
CFL1-206ENST00000527344 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
CFL1-206ENST00000527344 KIF13AQ9H1H9 1805 aa24.82■■□□□ 1.56
CFL1-206ENST00000527344 PRG4Q92954 1404 aaPredicted RBP24.81■■□□□ 1.56
CFL1-206ENST00000527344 JPH4Q96JJ6 628 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms