RNA–Protein interactions for RNA: ENST00000308162.9

CFL1-201, Transcript of cofilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFL1, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-201ENST00000308162 NISCHQ9Y2I1 1504 aa45.62■■■■■ 4.89
CFL1-201ENST00000308162 CCDC180Q9P1Z9 1646 aa40.53■■■■■ 4.08
CFL1-201ENST00000308162 ABCC9O60706 1549 aa39.75■■■■□ 3.95
CFL1-201ENST00000308162 RB1CC1Q8TDY2 1594 aa38.19■■■■□ 3.7
CFL1-201ENST00000308162 DCAF8L2P0C7V8 631 aa38.18■■■■□ 3.7
CFL1-201ENST00000308162 NACADO15069 1562 aa38.15■■■■□ 3.7
CFL1-201ENST00000308162 ZCCHC6Q5VYS8 1495 aaKnown RBP37.99■■■■□ 3.67
CFL1-201ENST00000308162 MYO15BQ96JP2 1530 aa37.92■■■■□ 3.66
CFL1-201ENST00000308162 DCAF1Q9Y4B6 1507 aa37.74■■■■□ 3.63
CFL1-201ENST00000308162 UNC13AQ9UPW8 1703 aa37.25■■■■□ 3.55
CFL1-201ENST00000308162 PABPN1Q86U42 306 aaKnown RBP eCLIP37.16■■■■□ 3.54
CFL1-201ENST00000308162 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
CFL1-201ENST00000308162 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
CFL1-201ENST00000308162 SHROOM4Q9ULL8 1493 aa36.67■■■■□ 3.46
CFL1-201ENST00000308162 DNAJC5BQ9UF47 199 aa36.54■■■■□ 3.44
CFL1-201ENST00000308162 EIF4G1Q04637 1599 aaKnown RBP36.07■■■■□ 3.37
CFL1-201ENST00000308162 CC2D2AQ9P2K1 1620 aa35.93■■■■□ 3.34
CFL1-201ENST00000308162 CECR2Q9BXF3 1484 aa35.73■■■■□ 3.31
CFL1-201ENST00000308162 SMARCA4P51532 1647 aa35.39■■■■□ 3.26
CFL1-201ENST00000308162 BAZ1AQ9NRL2 1556 aaPredicted RBP35.36■■■■□ 3.25
CFL1-201ENST00000308162 ATAD2BQ9ULI0 1458 aa35.24■■■■□ 3.23
CFL1-201ENST00000308162 NCAPD3P42695 1498 aa35.22■■■■□ 3.23
CFL1-201ENST00000308162 SMARCA2P51531 1590 aa35.18■■■■□ 3.22
CFL1-201ENST00000308162 MROH2BQ7Z745 1585 aa35.16■■■■□ 3.22
CFL1-201ENST00000308162 PEG3Q9GZU2 1588 aa35.05■■■■□ 3.2
CFL1-201ENST00000308162 HMGXB3Q12766 1538 aa35.03■■■■□ 3.2
CFL1-201ENST00000308162 BAZ1BQ9UIG0 1483 aaKnown RBP34.94■■■■□ 3.18
CFL1-201ENST00000308162 RSF1Q96T23 1441 aaPredicted RBP34.75■■■■□ 3.15
CFL1-201ENST00000308162 WIZO95785 1651 aa34.75■■■■□ 3.15
CFL1-201ENST00000308162 TOP2AP11388 1531 aaKnown RBP34.4■■■■□ 3.1
CFL1-201ENST00000308162 NESP48681 1621 aa34.37■■■■□ 3.09
CFL1-201ENST00000308162 LAMC3Q9Y6N6 1575 aa34.28■■■■□ 3.08
CFL1-201ENST00000308162 ERCC6Q03468 1493 aa34.27■■■■□ 3.08
CFL1-201ENST00000308162 CADPSQ9ULU8 1353 aa34.22■■■■□ 3.07
CFL1-201ENST00000308162 PDS5BQ9NTI5 1447 aa34.09■■■■□ 3.05
CFL1-201ENST00000308162 CCDC88BA6NC98 1476 aa34.01■■■■□ 3.04
CFL1-201ENST00000308162 CFTRP13569 1480 aa33.99■■■■□ 3.03
CFL1-201ENST00000308162 CUX2O14529 1486 aa33.92■■■■□ 3.02
CFL1-201ENST00000308162 KIF21AQ7Z4S6 1674 aa33.92■■■■□ 3.02
CFL1-201ENST00000308162 SUPT5HO00267 1087 aaKnown RBP33.87■■■■□ 3.01
CFL1-201ENST00000308162 THOC2Q8NI27 1593 aaKnown RBP33.84■■■■□ 3.01
CFL1-201ENST00000308162 FANCD2Q9BXW9 1451 aa33.8■■■■□ 3
CFL1-201ENST00000308162 CEP164Q9UPV0 1460 aa33.76■■■□□ 2.99
CFL1-201ENST00000308162 MRC2Q9UBG0 1479 aa33.72■■■□□ 2.99
CFL1-201ENST00000308162 PRDM2Q13029 1718 aa33.63■■■□□ 2.97
CFL1-201ENST00000308162 WDR62O43379 1518 aa33.6■■■□□ 2.97
CFL1-201ENST00000308162 URB2Q14146 1524 aaKnown RBP33.45■■■□□ 2.95
CFL1-201ENST00000308162 TOPBP1Q92547 1522 aa33.25■■■□□ 2.91
CFL1-201ENST00000308162 ABCC8Q09428 1581 aa33.25■■■□□ 2.91
CFL1-201ENST00000308162 DNMBPQ6XZF7 1577 aa33.2■■■□□ 2.91
CFL1-201ENST00000308162 IFT140Q96RY7 1462 aa33.06■■■□□ 2.88
CFL1-201ENST00000308162 CUX1P39880 1505 aa32.97■■■□□ 2.87
CFL1-201ENST00000308162 POLA1P09884 1462 aaPredicted RBP32.97■■■□□ 2.87
CFL1-201ENST00000308162 DNAJC5Q9H3Z4 198 aa32.95■■■□□ 2.87
CFL1-201ENST00000308162 ZNF608Q9ULD9 1512 aaPredicted RBP32.91■■■□□ 2.86
CFL1-201ENST00000308162 FGD5Q6ZNL6 1462 aa32.88■■■□□ 2.85
CFL1-201ENST00000308162 TARBP1Q13395 1621 aaKnown RBP32.87■■■□□ 2.85
CFL1-201ENST00000308162 SOGA1O94964 1423 aa32.85■■■□□ 2.85
CFL1-201ENST00000308162 RAD54L2Q9Y4B4 1467 aa32.83■■■□□ 2.85
CFL1-201ENST00000308162 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
CFL1-201ENST00000308162 EIF4G3O43432 1585 aaKnown RBP32.75■■■□□ 2.83
CFL1-201ENST00000308162 AQRO60306 1485 aaKnown RBP eCLIP32.74■■■□□ 2.832e-7■■■□□ 16.1
CFL1-201ENST00000308162 TOP2BQ02880 1626 aa32.68■■■□□ 2.82
CFL1-201ENST00000308162 TDRD9Q8NDG6 1382 aaKnown RBP32.68■■■□□ 2.82
CFL1-201ENST00000308162 SYNJ1O43426 1573 aa32.66■■■□□ 2.82
CFL1-201ENST00000308162 BIVM-ERCC5R4GMW8 1640 aa32.66■■■□□ 2.82
CFL1-201ENST00000308162 WDR97A6NE52 1622 aa32.61■■■□□ 2.81
CFL1-201ENST00000308162 ABCA10Q8WWZ4 1543 aa32.57■■■□□ 2.8
CFL1-201ENST00000308162 OSCARQ8IYS5 282 aa32.54■■■□□ 2.8
CFL1-201ENST00000308162 GRIN2BQ13224 1484 aa32.46■■■□□ 2.79
CFL1-201ENST00000308162 GAPVD1Q14C86 1478 aa32.46■■■□□ 2.79
CFL1-201ENST00000308162 SNAPC4Q5SXM2 1469 aa32.42■■■□□ 2.78
CFL1-201ENST00000308162 ABCA5Q8WWZ7 1642 aa32.41■■■□□ 2.78
CFL1-201ENST00000308162 MAGI1Q96QZ7 1491 aaPredicted RBP32.37■■■□□ 2.77
CFL1-201ENST00000308162 FBLN2P98095 1184 aa32.37■■■□□ 2.77
CFL1-201ENST00000308162 PBRM1Q86U86 1689 aa32.33■■■□□ 2.77
CFL1-201ENST00000308162 CHD1O14646 1710 aa32.31■■■□□ 2.76
CFL1-201ENST00000308162 CHMP7Q8WUX9 453 aaPredicted RBP32.28■■■□□ 2.76
CFL1-201ENST00000308162 SYNJ2O15056 1496 aa32.26■■■□□ 2.75
CFL1-201ENST00000308162 ERICH3Q5RHP9 1530 aa32.17■■■□□ 2.74
CFL1-201ENST00000308162 ADAMTS12P58397 1594 aa32.11■■■□□ 2.73
CFL1-201ENST00000308162 KIF27Q86VH2 1401 aa32.09■■■□□ 2.73
CFL1-201ENST00000308162 FHAD1B1AJZ9 1412 aa32.09■■■□□ 2.73
CFL1-201ENST00000308162 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
CFL1-201ENST00000308162 CLASP1Q7Z460 1538 aa32■■■□□ 2.71
CFL1-201ENST00000308162 TRIM41Q8WV44 630 aa32■■■□□ 2.71
CFL1-201ENST00000308162 IGF1RP08069 1367 aa31.99■■■□□ 2.71
CFL1-201ENST00000308162 ARHGEF11O15085 1522 aa31.97■■■□□ 2.71
CFL1-201ENST00000308162 RIMBP3CA6NJZ7 1639 aa31.96■■■□□ 2.71
CFL1-201ENST00000308162 RIMBP3BA6NNM3 1639 aa31.96■■■□□ 2.71
CFL1-201ENST00000308162 RIMBP3Q9UFD9 1639 aa31.96■■■□□ 2.71
CFL1-201ENST00000308162 NUP160Q12769 1436 aa31.91■■■□□ 2.7
CFL1-201ENST00000308162 CEP170Q5SW79 1584 aa31.86■■■□□ 2.69
CFL1-201ENST00000308162 CUL7Q14999 1698 aa31.84■■■□□ 2.69
CFL1-201ENST00000308162 CARMIL1Q5VZK9 1371 aa31.79■■■□□ 2.68
CFL1-201ENST00000308162 RUSC2Q8N2Y8 1516 aa31.78■■■□□ 2.68
CFL1-201ENST00000308162 CYB5RLQ6IPT4 315 aa31.72■■■□□ 2.67
CFL1-201ENST00000308162 ARAP1Q96P48 1450 aa31.72■■■□□ 2.67
CFL1-201ENST00000308162 SHROOM2Q13796 1616 aa31.64■■■□□ 2.65
CFL1-201ENST00000308162 JPH4Q96JJ6 628 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms