Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)20.77■□□□□ 0.921e-10■□□□□ 11
DDX59Q5T1V6 SNRNP70-209ENST00000601065 1757 ntTSL 320.58■□□□□ 0.891e-10■□□□□ 11
DDX59Q5T1V6 CDC42EP1-203ENST00000430687 720 ntAPPRIS ALT2 TSL 316.64■□□□□ 0.251e-10■□□□□ 11
DDX59Q5T1V6 SNRNP70-202ENST00000401730 3144 ntTSL 216.5■□□□□ 0.231e-10■□□□□ 11
DDX59Q5T1V6 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)15.26■□□□□ 0.031e-10■□□□□ 11
DDX59Q5T1V6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.051e-9■□□□□ 11
DDX59Q5T1V6 NDST2-207ENST00000639645 2448 ntTSL 5 BASIC10.48□□□□□ -0.731e-9■□□□□ 11
DDX59Q5T1V6 NDST2-206ENST00000465929 527 ntTSL 510.46□□□□□ -0.731e-9■□□□□ 11
DDX59Q5T1V6 NDST2-201ENST00000299641 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.771e-9■□□□□ 11
DDX59Q5T1V6 NDST2-202ENST00000309979 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.81e-9■□□□□ 11
DDX59Q5T1V6 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.152e-7■□□□□ 11
DDX59Q5T1V6 PLXNB1-203ENST00000449094 3863 ntTSL 211.9□□□□□ -0.52e-7■□□□□ 11
DDX59Q5T1V6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.471e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.391e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.58■■□□□ 1.371e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.211e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.63■■□□□ 1.211e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.63■■□□□ 1.211e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.211e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.63■■□□□ 1.211e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.211e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.63■■□□□ 1.211e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-220ENST00000519767 970 ntTSL 1 (best)22.63■■□□□ 1.211e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.211e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.63■■□□□ 1.211e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.181e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.76■□□□□ 0.751e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.19■□□□□ 0.341e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.57■□□□□ 0.241e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.221e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)13.04□□□□□ -0.321e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-221ENST00000520265 336 ntTSL 512.79□□□□□ -0.361e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.49□□□□□ -0.411e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC12.06□□□□□ -0.481e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC11.72□□□□□ -0.531e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.591e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC11.12□□□□□ -0.631e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC11.12□□□□□ -0.631e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.631e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)9.51□□□□□ -0.891e-7■□□□□ 10.9
DDX59Q5T1V6 VEGFA-214ENST00000493786 551 ntTSL 27.02□□□□□ -1.291e-7■□□□□ 10.9
DDX59Q5T1V6 PCBP2-226ENST00000562264 1145 ntTSL 59.9□□□□□ -0.825e-16■□□□□ 10.9
DDX59Q5T1V6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.543e-7■□□□□ 10.9
DDX59Q5T1V6 PAN3-204ENST00000503791 2443 ntTSL 223.28■■□□□ 1.322e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-212ENST00000475523 1645 ntTSL 1 (best)20.34■□□□□ 0.852e-6■□□□□ 10.9
DDX59Q5T1V6 ARHGEF1-223ENST00000617585 737 ntTSL 220.08■□□□□ 0.812e-6■□□□□ 10.9
DDX59Q5T1V6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.652e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.582e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-215ENST00000482602 434 ntTSL 517.57■□□□□ 0.42e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-210ENST00000466750 2603 ntTSL 217.33■□□□□ 0.362e-6■□□□□ 10.9
DDX59Q5T1V6 STXBP2-216ENST00000599648 472 ntTSL 217.17■□□□□ 0.342e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-205ENST00000435221 1225 ntAPPRIS ALT2 TSL 216.97■□□□□ 0.312e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-209ENST00000463835 872 ntTSL 216.74■□□□□ 0.272e-6■□□□□ 10.9
DDX59Q5T1V6 RSF1-208ENST00000530604 520 ntTSL 215.55■□□□□ 0.082e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-207ENST00000451778 827 ntAPPRIS ALT2 TSL 313.98□□□□□ -0.172e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.172e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-204ENST00000434817 834 ntAPPRIS ALT2 TSL 313.35□□□□□ -0.272e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-216ENST00000496064 1480 ntTSL 213.13□□□□□ -0.312e-6■□□□□ 10.9
DDX59Q5T1V6 LPP-207ENST00000443217 400 ntTSL 312.65□□□□□ -0.382e-6■□□□□ 10.9
DDX59Q5T1V6 ACSM3-203ENST00000501740 839 ntTSL 512.49□□□□□ -0.412e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-208ENST00000463471 4255 ntTSL 211.61□□□□□ -0.552e-6■□□□□ 10.9
DDX59Q5T1V6 TNFRSF14-211ENST00000471768 539 ntTSL 311.35□□□□□ -0.592e-6■□□□□ 10.9
DDX59Q5T1V6 SLC16A1-AS1-207ENST00000627431 1073 ntTSL 5 BASIC10.95□□□□□ -0.662e-6■□□□□ 10.9
DDX59Q5T1V6 ACSM3-213ENST00000568235 558 ntTSL 410.79□□□□□ -0.682e-6■□□□□ 10.9
DDX59Q5T1V6 LPP-206ENST00000430340 521 ntTSL 310.56□□□□□ -0.722e-6■□□□□ 10.9
DDX59Q5T1V6 ACSM3-205ENST00000561584 561 ntTSL 410.37□□□□□ -0.752e-6■□□□□ 10.9
DDX59Q5T1V6 LPP-209ENST00000454789 343 ntTSL 57.85□□□□□ -1.152e-6■□□□□ 10.9
DDX59Q5T1V6 LPP-205ENST00000426274 386 ntTSL 57.05□□□□□ -1.282e-6■□□□□ 10.9
DDX59Q5T1V6 LPP-201ENST00000414139 502 ntTSL 46.14□□□□□ -1.432e-6■□□□□ 10.9
DDX59Q5T1V6 LPP-210ENST00000457242 479 ntTSL 26.14□□□□□ -1.432e-6■□□□□ 10.9
DDX59Q5T1V6 WDR26-206ENST00000479778 2552 ntTSL 24.64□□□□□ -1.672e-6■□□□□ 10.9
DDX59Q5T1V6 WDR26-204ENST00000477425 529 ntTSL 34□□□□□ -1.772e-6■□□□□ 10.9
DDX59Q5T1V6 SLC16A1-AS1-201ENST00000413231 377 ntTSL 22.85□□□□□ -1.952e-6■□□□□ 10.9
DDX59Q5T1V6 WDR26-209ENST00000489825 751 ntTSL 52.65□□□□□ -1.992e-6■□□□□ 10.9
DDX59Q5T1V6 PCBP2-208ENST00000546652 823 ntTSL 510.26□□□□□ -0.774e-16■□□□□ 10.9
DDX59Q5T1V6 TCEA2-213ENST00000475792 655 ntTSL 215.49■□□□□ 0.072e-6■□□□□ 10.9
DDX59Q5T1V6 AP3D1-209ENST00000591284 580 ntTSL 517.03■□□□□ 0.328e-6■□□□□ 10.8
DDX59Q5T1V6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.238e-6■□□□□ 10.8
DDX59Q5T1V6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.198e-6■□□□□ 10.8
DDX59Q5T1V6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.472e-6■□□□□ 10.8
DDX59Q5T1V6 SH3BP1-202ENST00000417536 2858 ntTSL 218■□□□□ 0.472e-6■□□□□ 10.8
DDX59Q5T1V6 SH3BP1-206ENST00000469947 2612 ntTSL 213.31□□□□□ -0.282e-6■□□□□ 10.8
DDX59Q5T1V6 SH3BP1-203ENST00000451997 3123 ntTSL 212.43□□□□□ -0.422e-6■□□□□ 10.8
DDX59Q5T1V6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.818e-7■□□□□ 10.8
DDX59Q5T1V6 EPS8L2-211ENST00000527832 1597 ntTSL 219.73■□□□□ 0.758e-7■□□□□ 10.8
DDX59Q5T1V6 ISOC2-207ENST00000590921 2283 ntTSL 217.93■□□□□ 0.468e-7■□□□□ 10.8
DDX59Q5T1V6 EPS8L2-227ENST00000534449 491 ntTSL 317.24■□□□□ 0.358e-7■□□□□ 10.8
DDX59Q5T1V6 CISD3-206ENST00000619858 2326 ntTSL 1 (best)16.69■□□□□ 0.268e-7■□□□□ 10.8
DDX59Q5T1V6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.28e-7■□□□□ 10.8
DDX59Q5T1V6 PROX1-204ENST00000471129 900 ntTSL 315.52■□□□□ 0.088e-7■□□□□ 10.8
DDX59Q5T1V6 ISOC2-204ENST00000587226 854 ntTSL 515.15■□□□□ 0.028e-7■□□□□ 10.8
DDX59Q5T1V6 AFMID-213ENST00000591538 487 ntTSL 315.15■□□□□ 0.028e-7■□□□□ 10.8
DDX59Q5T1V6 EPS8L2-204ENST00000524973 403 ntTSL 214.93□□□□□ -0.028e-7■□□□□ 10.8
DDX59Q5T1V6 RAB11FIP3-204ENST00000449879 580 ntTSL 314.77□□□□□ -0.058e-7■□□□□ 10.8
DDX59Q5T1V6 RAB11FIP3-209ENST00000483002 585 ntTSL 414.77□□□□□ -0.058e-7■□□□□ 10.8
DDX59Q5T1V6 PROX1-207ENST00000607726 562 ntTSL 412.62□□□□□ -0.398e-7■□□□□ 10.8
DDX59Q5T1V6 AFMID-209ENST00000589107 577 ntTSL 411.34□□□□□ -0.598e-7■□□□□ 10.8
DDX59Q5T1V6 AFMID-212ENST00000591256 631 ntTSL 411.34□□□□□ -0.598e-7■□□□□ 10.8
DDX59Q5T1V6 AFMID-202ENST00000409257 1730 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.778e-7■□□□□ 10.8
DDX59Q5T1V6 AFMID-207ENST00000588199 778 ntTSL 510.2□□□□□ -0.788e-7■□□□□ 10.8
Retrieved 100 of 7,289 protein–RNA pairs in 553.6 ms