RNA–Protein interactions for RNA: ENST00000355272.10

AP3D1-202, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AP3D1, Length 5,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-202ENST00000355272 DCAF8L2P0C7V8 631 aa29.79■■■□□ 2.36
AP3D1-202ENST00000355272 NISCHQ9Y2I1 1504 aa28.71■■■□□ 2.19
AP3D1-202ENST00000355272 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
AP3D1-202ENST00000355272 SHROOM4Q9ULL8 1493 aa28.02■■■□□ 2.08
AP3D1-202ENST00000355272 EHMT2Q96KQ7 1210 aa27.47■■□□□ 1.99
AP3D1-202ENST00000355272 FAM9AQ8IZU1 332 aaPredicted RBP26.74■■□□□ 1.87
AP3D1-202ENST00000355272 TTBK1Q5TCY1 1321 aaPredicted RBP26.45■■□□□ 1.83
AP3D1-202ENST00000355272 PCGF6Q9BYE7 350 aa26.31■■□□□ 1.8
AP3D1-202ENST00000355272 APLP2Q06481 763 aa26.24■■□□□ 1.79
AP3D1-202ENST00000355272 RANGAP1P46060 587 aaPredicted RBP26.19■■□□□ 1.78
AP3D1-202ENST00000355272 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
AP3D1-202ENST00000355272 PELP1Q8IZL8 1130 aaKnown RBP25.78■■□□□ 1.72
AP3D1-202ENST00000355272 ATP1B4Q9UN42 357 aaPredicted RBP25.7■■□□□ 1.71
AP3D1-202ENST00000355272 UBTFP17480 764 aaKnown RBP25.69■■□□□ 1.7
AP3D1-202ENST00000355272 PPARGC1BQ86YN6 1023 aaKnown RBP25.64■■□□□ 1.7
AP3D1-202ENST00000355272 CCER1Q8TC90 406 aaPredicted RBP25.55■■□□□ 1.68
AP3D1-202ENST00000355272 ZEB1P37275 1124 aaPredicted RBP25.42■■□□□ 1.66
AP3D1-202ENST00000355272 CENPBP07199 599 aaPredicted RBP25.42■■□□□ 1.66
AP3D1-202ENST00000355272 LOC105371045A0A1W2PR82 267 aa25.33■■□□□ 1.65
AP3D1-202ENST00000355272 HRCP23327 699 aa25.21■■□□□ 1.63
AP3D1-202ENST00000355272 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
AP3D1-202ENST00000355272 YTHDC1Q96MU7 727 aaKnown RBP25.11■■□□□ 1.61
AP3D1-202ENST00000355272 ITGAEP38570 1179 aa24.98■■□□□ 1.59
AP3D1-202ENST00000355272 TRIM26Q12899 539 aaPredicted RBP24.97■■□□□ 1.59
AP3D1-202ENST00000355272 PABPN1Q86U42 306 aaKnown RBP eCLIP24.91■■□□□ 1.583e-6■■□□□ 14.5
AP3D1-202ENST00000355272 ABCC9O60706 1549 aa24.9■■□□□ 1.58
AP3D1-202ENST00000355272 ERICH6Q7L0X2 663 aa24.86■■□□□ 1.57
AP3D1-202ENST00000355272 HNRNPUL2Q1KMD3 747 aaKnown RBP24.81■■□□□ 1.56
AP3D1-202ENST00000355272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.77■■□□□ 1.56
AP3D1-202ENST00000355272 MYT1Q01538 1121 aa24.67■■□□□ 1.54
AP3D1-202ENST00000355272 NEFLP07196 543 aa24.58■■□□□ 1.53
AP3D1-202ENST00000355272 MYT1LQ9UL68 1186 aa24.51■■□□□ 1.51
AP3D1-202ENST00000355272 POLR3GLQ9BT43 218 aa24.51■■□□□ 1.51
AP3D1-202ENST00000355272 CNGB1Q14028 1251 aaPredicted RBP24.49■■□□□ 1.51
AP3D1-202ENST00000355272 DIEXFQ68CQ4 756 aaKnown RBP24.24■■□□□ 1.47
AP3D1-202ENST00000355272 FAM50AQ14320 339 aaKnown RBP24.24■■□□□ 1.47
AP3D1-202ENST00000355272 NEUROD1Q13562 356 aa24.04■■□□□ 1.44
AP3D1-202ENST00000355272 GTF3C3Q9Y5Q9 886 aa24.04■■□□□ 1.44
AP3D1-202ENST00000355272 FBLN2P98095 1184 aa24.03■■□□□ 1.44
AP3D1-202ENST00000355272 P3H3Q8IVL6 736 aa24.01■■□□□ 1.43
AP3D1-202ENST00000355272 TRIM52Q96A61 297 aa24■■□□□ 1.43
AP3D1-202ENST00000355272 ARID3CA6NKF2 412 aa23.97■■□□□ 1.43
AP3D1-202ENST00000355272 SLC4A1APQ9BWU0 796 aaKnown RBP23.91■■□□□ 1.42
AP3D1-202ENST00000355272 CSRNP3Q8WYN3 585 aa23.9■■□□□ 1.42
AP3D1-202ENST00000355272 ZNF326Q5BKZ1 582 aaKnown RBP23.82■■□□□ 1.4
AP3D1-202ENST00000355272 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
AP3D1-202ENST00000355272 BCANQ96GW7 911 aa23.74■■□□□ 1.39
AP3D1-202ENST00000355272 ZCCHC6Q5VYS8 1495 aaKnown RBP23.73■■□□□ 1.39
AP3D1-202ENST00000355272 ACIN1Q9UKV3 1341 aaKnown RBP23.69■■□□□ 1.38
AP3D1-202ENST00000355272 DAXXQ9UER7 740 aaPredicted RBP23.66■■□□□ 1.38
AP3D1-202ENST00000355272 ZNF316A6NFI3 1004 aaPredicted RBP23.59■■□□□ 1.37
AP3D1-202ENST00000355272 ZNF777Q9ULD5 760 aaPredicted RBP23.56■■□□□ 1.36
AP3D1-202ENST00000355272 ANP32CO43423 234 aa23.45■■□□□ 1.34
AP3D1-202ENST00000355272 RTL5Q5HYW3 569 aaPredicted RBP23.44■■□□□ 1.34
AP3D1-202ENST00000355272 CLSPNQ9HAW4 1339 aa23.38■■□□□ 1.33
AP3D1-202ENST00000355272 SCAF1Q9H7N4 1312 aaKnown RBP23.28■■□□□ 1.32
AP3D1-202ENST00000355272 CHIC2Q9UKJ5 165 aa23.26■■□□□ 1.31
AP3D1-202ENST00000355272 CDK11AQ9UQ88 783 aaPredicted RBP23.24■■□□□ 1.31
AP3D1-202ENST00000355272 DCAF1Q9Y4B6 1507 aa23.19■■□□□ 1.3
AP3D1-202ENST00000355272 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
AP3D1-202ENST00000355272 BCL11AQ9H165 835 aa23.17■■□□□ 1.3
AP3D1-202ENST00000355272 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
AP3D1-202ENST00000355272 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
AP3D1-202ENST00000355272 DDX10Q13206 875 aaKnown RBP23.12■■□□□ 1.29
AP3D1-202ENST00000355272 TONSLQ96HA7 1378 aa23.08■■□□□ 1.29
AP3D1-202ENST00000355272 CHGAP10645 457 aaKnown RBP23.07■■□□□ 1.28
AP3D1-202ENST00000355272 FKBP8Q14318 412 aa23.05■■□□□ 1.28
AP3D1-202ENST00000355272 HIRIP3Q9BW71 556 aaPredicted RBP23.05■■□□□ 1.28
AP3D1-202ENST00000355272 SLC24A1O60721 1099 aa23.04■■□□□ 1.28
AP3D1-202ENST00000355272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.03■■□□□ 1.284e-7■■□□□ 14.2
AP3D1-202ENST00000355272 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
AP3D1-202ENST00000355272 CLIP1P30622 1438 aa23■■□□□ 1.27
AP3D1-202ENST00000355272 CHMP7Q8WUX9 453 aaPredicted RBP22.96■■□□□ 1.27
AP3D1-202ENST00000355272 SALL2Q9Y467 1007 aaPredicted RBP22.95■■□□□ 1.26
AP3D1-202ENST00000355272 MTUS2Q5JR59 1369 aa22.94■■□□□ 1.26
AP3D1-202ENST00000355272 CANXP27824 592 aaKnown RBP22.94■■□□□ 1.26
AP3D1-202ENST00000355272 MIER1Q8N108 512 aa22.93■■□□□ 1.26
AP3D1-202ENST00000355272 FAM9BQ8IZU0 186 aa22.93■■□□□ 1.26
AP3D1-202ENST00000355272 KDM2AQ9Y2K7 1162 aa22.91■■□□□ 1.26
AP3D1-202ENST00000355272 RB1CC1Q8TDY2 1594 aa22.91■■□□□ 1.26
AP3D1-202ENST00000355272 HNRNPUQ00839 825 aaKnown RBP eCLIP22.91■■□□□ 1.26
AP3D1-202ENST00000355272 RRP7BPQ9NSQ0 103 aa22.89■■□□□ 1.26
AP3D1-202ENST00000355272 NPM1P06748 294 aaKnown RBP eCLIP22.88■■□□□ 1.25
AP3D1-202ENST00000355272 SENP3Q9H4L4 574 aaPredicted RBP22.85■■□□□ 1.25
AP3D1-202ENST00000355272 CEP162Q5TB80 1403 aa22.85■■□□□ 1.25
AP3D1-202ENST00000355272 TSPY4P0CV99 314 aa22.84■■□□□ 1.25
AP3D1-202ENST00000355272 TSPY10P0CW01 314 aa22.84■■□□□ 1.25
AP3D1-202ENST00000355272 STAG3Q9UJ98 1225 aa22.84■■□□□ 1.25
AP3D1-202ENST00000355272 ESF1Q9H501 851 aaKnown RBP22.84■■□□□ 1.25
AP3D1-202ENST00000355272 WRNQ14191 1432 aaPredicted RBP eCLIP22.83■■□□□ 1.256e-6■□□□□ 9
AP3D1-202ENST00000355272 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
AP3D1-202ENST00000355272 NPM2Q86SE8 214 aaKnown RBP22.82■■□□□ 1.24
AP3D1-202ENST00000355272 NEFMP07197 916 aa22.8■■□□□ 1.24
AP3D1-202ENST00000355272 ANP32AP39687 249 aaKnown RBP22.8■■□□□ 1.24
AP3D1-202ENST00000355272 KCNH8Q96L42 1107 aa22.8■■□□□ 1.24
AP3D1-202ENST00000355272 ZBTB47Q9UFB7 747 aaPredicted RBP22.79■■□□□ 1.24
AP3D1-202ENST00000355272 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
AP3D1-202ENST00000355272 GOLGA3Q08378 1498 aa22.72■■□□□ 1.23
AP3D1-202ENST00000355272 SENP3-EIF4A1A0A087X0R7 540 aa22.69■■□□□ 1.22
AP3D1-202ENST00000355272 NACADO15069 1562 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms