RNA–Protein interactions for RNA: ENST00000561584.5

ACSM3-205, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 4

Gene ACSM3, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-205ENST00000561584 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
ACSM3-205ENST00000561584 ABCC9O60706 1549 aa26.44■■□□□ 1.82
ACSM3-205ENST00000561584 CCDC180Q9P1Z9 1646 aa26.29■■□□□ 1.8
ACSM3-205ENST00000561584 RB1CC1Q8TDY2 1594 aa25.1■■□□□ 1.61
ACSM3-205ENST00000561584 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
ACSM3-205ENST00000561584 NACADO15069 1562 aa24.9■■□□□ 1.58
ACSM3-205ENST00000561584 DNAJC5BQ9UF47 199 aa24.86■■□□□ 1.57
ACSM3-205ENST00000561584 PABPN1Q86U42 306 aaKnown RBP eCLIP24.64■■□□□ 1.54
ACSM3-205ENST00000561584 UNC13AQ9UPW8 1703 aa24.51■■□□□ 1.51
ACSM3-205ENST00000561584 MYO15BQ96JP2 1530 aa24.49■■□□□ 1.51
ACSM3-205ENST00000561584 BICRAQ9NZM4 1560 aa24.33■■□□□ 1.49
ACSM3-205ENST00000561584 ZCCHC6Q5VYS8 1495 aaKnown RBP24.24■■□□□ 1.47
ACSM3-205ENST00000561584 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
ACSM3-205ENST00000561584 SCRIBQ14160 1630 aa24■■□□□ 1.43
ACSM3-205ENST00000561584 SHROOM4Q9ULL8 1493 aa23.98■■□□□ 1.43
ACSM3-205ENST00000561584 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
ACSM3-205ENST00000561584 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
ACSM3-205ENST00000561584 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
ACSM3-205ENST00000561584 NCAPD3P42695 1498 aa22.98■■□□□ 1.27
ACSM3-205ENST00000561584 ATAD2BQ9ULI0 1458 aa22.91■■□□□ 1.26
ACSM3-205ENST00000561584 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.25
ACSM3-205ENST00000561584 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
ACSM3-205ENST00000561584 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
ACSM3-205ENST00000561584 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
ACSM3-205ENST00000561584 HMGXB3Q12766 1538 aa22.78■■□□□ 1.24
ACSM3-205ENST00000561584 CUX2O14529 1486 aa22.77■■□□□ 1.24
ACSM3-205ENST00000561584 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
ACSM3-205ENST00000561584 BAZ1BQ9UIG0 1483 aaKnown RBP22.71■■□□□ 1.23
ACSM3-205ENST00000561584 NESP48681 1621 aa22.67■■□□□ 1.22
ACSM3-205ENST00000561584 PEG3Q9GZU2 1588 aa22.6■■□□□ 1.21
ACSM3-205ENST00000561584 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.2
ACSM3-205ENST00000561584 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
ACSM3-205ENST00000561584 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
ACSM3-205ENST00000561584 PDS5BQ9NTI5 1447 aa22.4■■□□□ 1.18
ACSM3-205ENST00000561584 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
ACSM3-205ENST00000561584 WIZO95785 1651 aa22.32■■□□□ 1.16
ACSM3-205ENST00000561584 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
ACSM3-205ENST00000561584 MRC2Q9UBG0 1479 aa22.18■■□□□ 1.14
ACSM3-205ENST00000561584 WDR62O43379 1518 aa22.1■■□□□ 1.13
ACSM3-205ENST00000561584 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
ACSM3-205ENST00000561584 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
ACSM3-205ENST00000561584 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
ACSM3-205ENST00000561584 CFTRP13569 1480 aa22.02■■□□□ 1.12
ACSM3-205ENST00000561584 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
ACSM3-205ENST00000561584 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
ACSM3-205ENST00000561584 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
ACSM3-205ENST00000561584 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
ACSM3-205ENST00000561584 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
ACSM3-205ENST00000561584 PRDM2Q13029 1718 aa21.78■■□□□ 1.08
ACSM3-205ENST00000561584 IFT140Q96RY7 1462 aa21.64■■□□□ 1.06
ACSM3-205ENST00000561584 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
ACSM3-205ENST00000561584 ZNF608Q9ULD9 1512 aaPredicted RBP21.62■■□□□ 1.05
ACSM3-205ENST00000561584 ABCC8Q09428 1581 aa21.58■■□□□ 1.05
ACSM3-205ENST00000561584 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
ACSM3-205ENST00000561584 EIF4G3O43432 1585 aaKnown RBP21.48■■□□□ 1.03
ACSM3-205ENST00000561584 RIMBP3CA6NJZ7 1639 aa21.46■■□□□ 1.03
ACSM3-205ENST00000561584 RIMBP3BA6NNM3 1639 aa21.46■■□□□ 1.03
ACSM3-205ENST00000561584 RIMBP3Q9UFD9 1639 aa21.46■■□□□ 1.03
ACSM3-205ENST00000561584 AQRO60306 1485 aaKnown RBP eCLIP21.44■■□□□ 1.02
ACSM3-205ENST00000561584 TARBP1Q13395 1621 aaKnown RBP21.41■■□□□ 1.02
ACSM3-205ENST00000561584 FBLN2P98095 1184 aa21.4■■□□□ 1.02
ACSM3-205ENST00000561584 ARHGEF11O15085 1522 aa21.39■■□□□ 1.01
ACSM3-205ENST00000561584 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
ACSM3-205ENST00000561584 CHD1O14646 1710 aa21.35■■□□□ 1.01
ACSM3-205ENST00000561584 RAD54L2Q9Y4B4 1467 aa21.34■■□□□ 1.01
ACSM3-205ENST00000561584 SOGA1O94964 1423 aa21.34■■□□□ 1.01
ACSM3-205ENST00000561584 CYB5RLQ6IPT4 315 aa21.32■■□□□ 1
ACSM3-205ENST00000561584 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
ACSM3-205ENST00000561584 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
ACSM3-205ENST00000561584 CUX1P39880 1505 aa21.21■□□□□ 0.99
ACSM3-205ENST00000561584 CHMP7Q8WUX9 453 aaPredicted RBP21.2■□□□□ 0.98
ACSM3-205ENST00000561584 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
ACSM3-205ENST00000561584 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
ACSM3-205ENST00000561584 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
ACSM3-205ENST00000561584 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
ACSM3-205ENST00000561584 TRHP20396 242 aaPredicted RBP21.14■□□□□ 0.97
ACSM3-205ENST00000561584 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
ACSM3-205ENST00000561584 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
ACSM3-205ENST00000561584 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
ACSM3-205ENST00000561584 CLASP1Q7Z460 1538 aa21.07■□□□□ 0.96
ACSM3-205ENST00000561584 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
ACSM3-205ENST00000561584 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
ACSM3-205ENST00000561584 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
ACSM3-205ENST00000561584 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
ACSM3-205ENST00000561584 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
ACSM3-205ENST00000561584 WRNQ14191 1432 aaPredicted RBP eCLIP20.94■□□□□ 0.94
ACSM3-205ENST00000561584 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
ACSM3-205ENST00000561584 GRIN2AQ12879 1464 aa20.85■□□□□ 0.93
ACSM3-205ENST00000561584 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
ACSM3-205ENST00000561584 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
ACSM3-205ENST00000561584 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
ACSM3-205ENST00000561584 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
ACSM3-205ENST00000561584 NUP160Q12769 1436 aa20.76■□□□□ 0.91
ACSM3-205ENST00000561584 ERCC6L2Q5T890 1561 aa20.76■□□□□ 0.91
ACSM3-205ENST00000561584 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
ACSM3-205ENST00000561584 SHROOM2Q13796 1616 aa20.67■□□□□ 0.9
ACSM3-205ENST00000561584 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
ACSM3-205ENST00000561584 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
ACSM3-205ENST00000561584 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
ACSM3-205ENST00000561584 RUSC2Q8N2Y8 1516 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms