RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 NISCHQ9Y2I1 1504 aa43.18■■■■■ 4.5
CDC42EP1-203ENST00000430687 CCDC180Q9P1Z9 1646 aa38.18■■■■□ 3.7
CDC42EP1-203ENST00000430687 ABCC9O60706 1549 aa36.91■■■■□ 3.5
CDC42EP1-203ENST00000430687 ZCCHC6Q5VYS8 1495 aaKnown RBP36.05■■■■□ 3.36
CDC42EP1-203ENST00000430687 DCAF8L2P0C7V8 631 aa35.88■■■■□ 3.33
CDC42EP1-203ENST00000430687 NACADO15069 1562 aa35.84■■■■□ 3.33
CDC42EP1-203ENST00000430687 MYO15BQ96JP2 1530 aa35.83■■■■□ 3.33
CDC42EP1-203ENST00000430687 DCAF1Q9Y4B6 1507 aa35.81■■■■□ 3.32
CDC42EP1-203ENST00000430687 RB1CC1Q8TDY2 1594 aa35.76■■■■□ 3.31
CDC42EP1-203ENST00000430687 UNC13AQ9UPW8 1703 aa34.81■■■■□ 3.16
CDC42EP1-203ENST00000430687 SCRIBQ14160 1630 aa34.81■■■■□ 3.16
CDC42EP1-203ENST00000430687 BICRAQ9NZM4 1560 aa34.62■■■■□ 3.13
CDC42EP1-203ENST00000430687 PABPN1Q86U42 306 aaKnown RBP eCLIP34.58■■■■□ 3.13
CDC42EP1-203ENST00000430687 SHROOM4Q9ULL8 1493 aa34.41■■■■□ 3.1
CDC42EP1-203ENST00000430687 EIF4G1Q04637 1599 aaKnown RBP33.68■■■□□ 2.98
CDC42EP1-203ENST00000430687 CECR2Q9BXF3 1484 aa33.55■■■□□ 2.96
CDC42EP1-203ENST00000430687 DNAJC5BQ9UF47 199 aa33.51■■■□□ 2.95
CDC42EP1-203ENST00000430687 BAZ1AQ9NRL2 1556 aaPredicted RBP33.45■■■□□ 2.95
CDC42EP1-203ENST00000430687 CC2D2AQ9P2K1 1620 aa33.42■■■□□ 2.94
CDC42EP1-203ENST00000430687 SMARCA4P51532 1647 aa33.38■■■□□ 2.93
CDC42EP1-203ENST00000430687 MROH2BQ7Z745 1585 aa33.26■■■□□ 2.91
CDC42EP1-203ENST00000430687 ATAD2BQ9ULI0 1458 aa33.13■■■□□ 2.89
CDC42EP1-203ENST00000430687 SMARCA2P51531 1590 aa33.13■■■□□ 2.89
CDC42EP1-203ENST00000430687 PEG3Q9GZU2 1588 aa33.1■■■□□ 2.89
CDC42EP1-203ENST00000430687 NCAPD3P42695 1498 aa33.09■■■□□ 2.89
CDC42EP1-203ENST00000430687 RSF1Q96T23 1441 aaPredicted RBP33.07■■■□□ 2.88
CDC42EP1-203ENST00000430687 HMGXB3Q12766 1538 aa32.93■■■□□ 2.86
CDC42EP1-203ENST00000430687 BAZ1BQ9UIG0 1483 aaKnown RBP32.87■■■□□ 2.85
CDC42EP1-203ENST00000430687 WIZO95785 1651 aa32.87■■■□□ 2.85
CDC42EP1-203ENST00000430687 TOP2AP11388 1531 aaKnown RBP32.61■■■□□ 2.81
CDC42EP1-203ENST00000430687 SUPT5HO00267 1087 aaKnown RBP32.51■■■□□ 2.79
CDC42EP1-203ENST00000430687 CCDC88BA6NC98 1476 aa32.23■■■□□ 2.75
CDC42EP1-203ENST00000430687 CADPSQ9ULU8 1353 aa32.14■■■□□ 2.74
CDC42EP1-203ENST00000430687 LAMC3Q9Y6N6 1575 aa32.11■■■□□ 2.73
CDC42EP1-203ENST00000430687 NESP48681 1621 aa32.05■■■□□ 2.72
CDC42EP1-203ENST00000430687 CFTRP13569 1480 aa32.03■■■□□ 2.72
CDC42EP1-203ENST00000430687 PDS5BQ9NTI5 1447 aa31.92■■■□□ 2.7
CDC42EP1-203ENST00000430687 ERCC6Q03468 1493 aa31.81■■■□□ 2.68
CDC42EP1-203ENST00000430687 FANCD2Q9BXW9 1451 aa31.73■■■□□ 2.67
CDC42EP1-203ENST00000430687 PRDM2Q13029 1718 aa31.7■■■□□ 2.67
CDC42EP1-203ENST00000430687 CEP164Q9UPV0 1460 aa31.65■■■□□ 2.66
CDC42EP1-203ENST00000430687 KIF21AQ7Z4S6 1674 aa31.65■■■□□ 2.66
CDC42EP1-203ENST00000430687 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
CDC42EP1-203ENST00000430687 THOC2Q8NI27 1593 aaKnown RBP31.48■■■□□ 2.63
CDC42EP1-203ENST00000430687 WDR62O43379 1518 aa31.39■■■□□ 2.62
CDC42EP1-203ENST00000430687 CUX2O14529 1486 aa31.38■■■□□ 2.61
CDC42EP1-203ENST00000430687 ABCC8Q09428 1581 aa31.37■■■□□ 2.61
CDC42EP1-203ENST00000430687 URB2Q14146 1524 aaKnown RBP31.36■■■□□ 2.61
CDC42EP1-203ENST00000430687 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.6
CDC42EP1-203ENST00000430687 TOPBP1Q92547 1522 aa31.26■■■□□ 2.59
CDC42EP1-203ENST00000430687 WRNQ14191 1432 aaPredicted RBP eCLIP31.17■■■□□ 2.58
CDC42EP1-203ENST00000430687 CUX1P39880 1505 aa31.17■■■□□ 2.58
CDC42EP1-203ENST00000430687 TOP2BQ02880 1626 aa31.03■■■□□ 2.56
CDC42EP1-203ENST00000430687 POLA1P09884 1462 aaPredicted RBP31.02■■■□□ 2.56
CDC42EP1-203ENST00000430687 BIVM-ERCC5R4GMW8 1640 aa31.01■■■□□ 2.55
CDC42EP1-203ENST00000430687 FGD5Q6ZNL6 1462 aa31.01■■■□□ 2.55
CDC42EP1-203ENST00000430687 IFT140Q96RY7 1462 aa31.01■■■□□ 2.55
CDC42EP1-203ENST00000430687 SYNJ1O43426 1573 aa31■■■□□ 2.55
CDC42EP1-203ENST00000430687 SOGA1O94964 1423 aa30.94■■■□□ 2.54
CDC42EP1-203ENST00000430687 TARBP1Q13395 1621 aaKnown RBP30.87■■■□□ 2.53
CDC42EP1-203ENST00000430687 RAD54L2Q9Y4B4 1467 aa30.86■■■□□ 2.53
CDC42EP1-203ENST00000430687 ABCA10Q8WWZ4 1543 aa30.77■■■□□ 2.52
CDC42EP1-203ENST00000430687 ZNF608Q9ULD9 1512 aaPredicted RBP30.75■■■□□ 2.51
CDC42EP1-203ENST00000430687 TRIM41Q8WV44 630 aa30.75■■■□□ 2.51
CDC42EP1-203ENST00000430687 WDR97A6NE52 1622 aa30.73■■■□□ 2.51
CDC42EP1-203ENST00000430687 TDRD9Q8NDG6 1382 aaKnown RBP30.68■■■□□ 2.5
CDC42EP1-203ENST00000430687 AQRO60306 1485 aaKnown RBP eCLIP30.66■■■□□ 2.54e-7■■■■□ 24.5
CDC42EP1-203ENST00000430687 EIF4G3O43432 1585 aaKnown RBP30.64■■■□□ 2.5
CDC42EP1-203ENST00000430687 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
CDC42EP1-203ENST00000430687 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
CDC42EP1-203ENST00000430687 ABCA5Q8WWZ7 1642 aa30.55■■■□□ 2.48
CDC42EP1-203ENST00000430687 GRIN2BQ13224 1484 aa30.53■■■□□ 2.48
CDC42EP1-203ENST00000430687 KIF27Q86VH2 1401 aa30.51■■■□□ 2.47
CDC42EP1-203ENST00000430687 DNAJC5Q9H3Z4 198 aa30.48■■■□□ 2.47
CDC42EP1-203ENST00000430687 MAGI1Q96QZ7 1491 aaPredicted RBP30.41■■■□□ 2.46
CDC42EP1-203ENST00000430687 ERICH3Q5RHP9 1530 aa30.41■■■□□ 2.46
CDC42EP1-203ENST00000430687 PBRM1Q86U86 1689 aa30.39■■■□□ 2.46
CDC42EP1-203ENST00000430687 SNAPC4Q5SXM2 1469 aa30.38■■■□□ 2.45
CDC42EP1-203ENST00000430687 IGF1RP08069 1367 aa30.33■■■□□ 2.45
CDC42EP1-203ENST00000430687 SYNJ2O15056 1496 aa30.28■■■□□ 2.44
CDC42EP1-203ENST00000430687 RUSC2Q8N2Y8 1516 aa30.27■■■□□ 2.44
CDC42EP1-203ENST00000430687 FHAD1B1AJZ9 1412 aa30.27■■■□□ 2.44
CDC42EP1-203ENST00000430687 EEA1Q15075 1411 aa30.25■■■□□ 2.43
CDC42EP1-203ENST00000430687 CHMP7Q8WUX9 453 aaPredicted RBP30.25■■■□□ 2.43
CDC42EP1-203ENST00000430687 ADAMTS12P58397 1594 aa30.23■■■□□ 2.43
CDC42EP1-203ENST00000430687 FBLN2P98095 1184 aa30.22■■■□□ 2.43
CDC42EP1-203ENST00000430687 CUL7Q14999 1698 aa30.18■■■□□ 2.42
CDC42EP1-203ENST00000430687 OSCARQ8IYS5 282 aa30.18■■■□□ 2.42
CDC42EP1-203ENST00000430687 CARMIL1Q5VZK9 1371 aa30.15■■■□□ 2.42
CDC42EP1-203ENST00000430687 CSRNP3Q8WYN3 585 aa30.12■■■□□ 2.41
CDC42EP1-203ENST00000430687 CHD1O14646 1710 aa30.12■■■□□ 2.41
CDC42EP1-203ENST00000430687 GRIN2AQ12879 1464 aa30.12■■■□□ 2.41
CDC42EP1-203ENST00000430687 PRXQ9BXM0 1461 aa30.02■■■□□ 2.4
CDC42EP1-203ENST00000430687 RAPGEF2Q9Y4G8 1499 aa30.02■■■□□ 2.4
CDC42EP1-203ENST00000430687 FAM9AQ8IZU1 332 aaPredicted RBP30.01■■■□□ 2.39
CDC42EP1-203ENST00000430687 NUP160Q12769 1436 aa29.98■■■□□ 2.39
CDC42EP1-203ENST00000430687 CEP170Q5SW79 1584 aa29.9■■■□□ 2.38
CDC42EP1-203ENST00000430687 CLASP1Q7Z460 1538 aa29.89■■■□□ 2.38
CDC42EP1-203ENST00000430687 KIAA0586Q9BVV6 1533 aa29.82■■■□□ 2.36
CDC42EP1-203ENST00000430687 KIF21BO75037 1637 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms