RNA–Protein interactions for RNA: ENST00000457242.1

LPP-210, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 2

Gene LPP, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-210ENST00000457242 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
LPP-210ENST00000457242 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
LPP-210ENST00000457242 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
LPP-210ENST00000457242 PHF23Q9BUL5 403 aaPredicted RBP21.15■□□□□ 0.98
LPP-210ENST00000457242 FOXD1Q16676 465 aa20.15■□□□□ 0.82
LPP-210ENST00000457242 POTEDQ86YR6 584 aa19.52■□□□□ 0.72
LPP-210ENST00000457242 MSH5O43196 834 aa18.94■□□□□ 0.62
LPP-210ENST00000457242 PIAS4Q8N2W9 510 aaPredicted RBP18.62■□□□□ 0.57
LPP-210ENST00000457242 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
LPP-210ENST00000457242 ADRA2BP18089 450 aa18.34■□□□□ 0.53
LPP-210ENST00000457242 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
LPP-210ENST00000457242 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
LPP-210ENST00000457242 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
LPP-210ENST00000457242 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
LPP-210ENST00000457242 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
LPP-210ENST00000457242 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
LPP-210ENST00000457242 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
LPP-210ENST00000457242 HOXD11P31277 338 aaPredicted RBP16.13■□□□□ 0.17
LPP-210ENST00000457242 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
LPP-210ENST00000457242 C1QBPQ07021 282 aaKnown RBP15.86■□□□□ 0.13
LPP-210ENST00000457242 RNF216Q9NWF9 866 aaPredicted RBP15.83■□□□□ 0.12
LPP-210ENST00000457242 CNKSR2Q8WXI2 1034 aa15.82■□□□□ 0.12
LPP-210ENST00000457242 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
LPP-210ENST00000457242 NISCHQ9Y2I1 1504 aa15.47■□□□□ 0.07
LPP-210ENST00000457242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
LPP-210ENST00000457242 POTEHQ6S545 545 aa15.15■□□□□ 0.02
LPP-210ENST00000457242 NCBP3Q53F19 620 aaKnown RBP15.14■□□□□ 0.01
LPP-210ENST00000457242 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
LPP-210ENST00000457242 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
LPP-210ENST00000457242 DSG3P32926 999 aa14.99□□□□□ -0.01
LPP-210ENST00000457242 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
LPP-210ENST00000457242 CAPN15O75808 1086 aa14.87□□□□□ -0.03
LPP-210ENST00000457242 SLC4A2P04920 1241 aa14.58□□□□□ -0.08
LPP-210ENST00000457242 ABCB7O75027 752 aa14.54□□□□□ -0.08
LPP-210ENST00000457242 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.09
LPP-210ENST00000457242 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
LPP-210ENST00000457242 KCNA4P22459 653 aa14.32□□□□□ -0.12
LPP-210ENST00000457242 APLP2Q06481 763 aa14.32□□□□□ -0.12
LPP-210ENST00000457242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
LPP-210ENST00000457242 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
LPP-210ENST00000457242 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
LPP-210ENST00000457242 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
LPP-210ENST00000457242 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
LPP-210ENST00000457242 POLA2Q14181 598 aa14.03□□□□□ -0.16
LPP-210ENST00000457242 SP7Q8TDD2 431 aaPredicted RBP13.93□□□□□ -0.18
LPP-210ENST00000457242 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
LPP-210ENST00000457242 AKT1S1Q96B36 256 aa13.79□□□□□ -0.2
LPP-210ENST00000457242 PIP4P2Q8N4L2 257 aa13.75□□□□□ -0.21
LPP-210ENST00000457242 ATF5Q9Y2D1 282 aaPredicted RBP13.74□□□□□ -0.21
LPP-210ENST00000457242 REM2Q8IYK8 340 aaPredicted RBP13.72□□□□□ -0.21
LPP-210ENST00000457242 CCDC180Q9P1Z9 1646 aa13.67□□□□□ -0.22
LPP-210ENST00000457242 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
LPP-210ENST00000457242 HAX1O00165 279 aa13.59□□□□□ -0.23
LPP-210ENST00000457242 PITPNM1O00562 1244 aa13.59□□□□□ -0.23
LPP-210ENST00000457242 FXR2P51116 673 aaKnown RBP eCLIP13.58□□□□□ -0.24
LPP-210ENST00000457242 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
LPP-210ENST00000457242 EVX2Q03828 476 aa13.53□□□□□ -0.24
LPP-210ENST00000457242 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
LPP-210ENST00000457242 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
LPP-210ENST00000457242 ZBTB22O15209 634 aa13.22□□□□□ -0.29
LPP-210ENST00000457242 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
LPP-210ENST00000457242 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
LPP-210ENST00000457242 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
LPP-210ENST00000457242 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
LPP-210ENST00000457242 C19orf67A6NJJ6 358 aa13.16□□□□□ -0.3
LPP-210ENST00000457242 GABBR2O75899 941 aa13.11□□□□□ -0.31
LPP-210ENST00000457242 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
LPP-210ENST00000457242 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
LPP-210ENST00000457242 SPDYE1Q8NFV5 336 aaPredicted RBP13.07□□□□□ -0.32
LPP-210ENST00000457242 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
LPP-210ENST00000457242 LHX8Q68G74 356 aa13.06□□□□□ -0.32
LPP-210ENST00000457242 FBLN2P98095 1184 aa13.04□□□□□ -0.32
LPP-210ENST00000457242 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
LPP-210ENST00000457242 ABCC9O60706 1549 aa13.02□□□□□ -0.33
LPP-210ENST00000457242 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
LPP-210ENST00000457242 ZCCHC6Q5VYS8 1495 aaKnown RBP12.96□□□□□ -0.34
LPP-210ENST00000457242 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
LPP-210ENST00000457242 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
LPP-210ENST00000457242 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
LPP-210ENST00000457242 MYO15BQ96JP2 1530 aa12.81□□□□□ -0.36
LPP-210ENST00000457242 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
LPP-210ENST00000457242 PABPN1Q86U42 306 aaKnown RBP eCLIP12.77□□□□□ -0.37
LPP-210ENST00000457242 NACADO15069 1562 aa12.77□□□□□ -0.37
LPP-210ENST00000457242 DCAF8L2P0C7V8 631 aa12.75□□□□□ -0.37
LPP-210ENST00000457242 CD44P16070 742 aaKnown RBP12.74□□□□□ -0.37
LPP-210ENST00000457242 RB1CC1Q8TDY2 1594 aa12.7□□□□□ -0.38
LPP-210ENST00000457242 FARP1Q9Y4F1 1045 aaPredicted RBP12.7□□□□□ -0.38
LPP-210ENST00000457242 PLSCR2Q9NRY7 297 aa12.64□□□□□ -0.39
LPP-210ENST00000457242 CLCN6P51797 869 aa12.57□□□□□ -0.4
LPP-210ENST00000457242 DCBLD2Q96PD2 775 aa12.55□□□□□ -0.4
LPP-210ENST00000457242 ZNF579Q8NAF0 562 aaKnown RBP12.53□□□□□ -0.4
LPP-210ENST00000457242 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
LPP-210ENST00000457242 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
LPP-210ENST00000457242 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
LPP-210ENST00000457242 GALR2O43603 387 aaPredicted RBP12.47□□□□□ -0.41
LPP-210ENST00000457242 CREBZFQ9NS37 354 aa12.44□□□□□ -0.42
LPP-210ENST00000457242 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
LPP-210ENST00000457242 UNC13AQ9UPW8 1703 aa12.4□□□□□ -0.43
LPP-210ENST00000457242 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
LPP-210ENST00000457242 POTEMA6NI47 508 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms