RNA–Protein interactions for RNA: ENST00000449094.5

PLXNB1-203, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 3,863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-203ENST00000449094 NISCHQ9Y2I1 1504 aa24.37■■□□□ 1.49
PLXNB1-203ENST00000449094 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
PLXNB1-203ENST00000449094 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
PLXNB1-203ENST00000449094 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
PLXNB1-203ENST00000449094 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
PLXNB1-203ENST00000449094 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
PLXNB1-203ENST00000449094 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
PLXNB1-203ENST00000449094 ABCC9O60706 1549 aa20.26■□□□□ 0.83
PLXNB1-203ENST00000449094 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
PLXNB1-203ENST00000449094 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.81
PLXNB1-203ENST00000449094 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
PLXNB1-203ENST00000449094 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
PLXNB1-203ENST00000449094 HRCP23327 699 aa19.86■□□□□ 0.77
PLXNB1-203ENST00000449094 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
PLXNB1-203ENST00000449094 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
PLXNB1-203ENST00000449094 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.751e-9■□□□□ 10.5
PLXNB1-203ENST00000449094 PPARGC1BQ86YN6 1023 aaKnown RBP19.6■□□□□ 0.73
PLXNB1-203ENST00000449094 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
PLXNB1-203ENST00000449094 TTBK1Q5TCY1 1321 aaPredicted RBP19.5■□□□□ 0.71
PLXNB1-203ENST00000449094 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
PLXNB1-203ENST00000449094 RSF1Q96T23 1441 aaPredicted RBP19.37■□□□□ 0.69
PLXNB1-203ENST00000449094 RANGAP1P46060 587 aaPredicted RBP19.36■□□□□ 0.69
PLXNB1-203ENST00000449094 UBTFP17480 764 aaKnown RBP19.32■□□□□ 0.68
PLXNB1-203ENST00000449094 NACADO15069 1562 aa19.31■□□□□ 0.68
PLXNB1-203ENST00000449094 TRIM26Q12899 539 aaPredicted RBP19.25■□□□□ 0.67
PLXNB1-203ENST00000449094 RB1CC1Q8TDY2 1594 aa19.23■□□□□ 0.67
PLXNB1-203ENST00000449094 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
PLXNB1-203ENST00000449094 APLP2Q06481 763 aa19.14■□□□□ 0.66
PLXNB1-203ENST00000449094 ZEB1P37275 1124 aaPredicted RBP19.1■□□□□ 0.65
PLXNB1-203ENST00000449094 MROH2BQ7Z745 1585 aa18.99■□□□□ 0.63
PLXNB1-203ENST00000449094 CCER1Q8TC90 406 aaPredicted RBP18.94■□□□□ 0.62
PLXNB1-203ENST00000449094 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
PLXNB1-203ENST00000449094 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
PLXNB1-203ENST00000449094 CSRNP3Q8WYN3 585 aa18.81■□□□□ 0.6
PLXNB1-203ENST00000449094 ATP1B4Q9UN42 357 aaPredicted RBP18.8■□□□□ 0.6
PLXNB1-203ENST00000449094 WIZO95785 1651 aa18.77■□□□□ 0.6
PLXNB1-203ENST00000449094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
PLXNB1-203ENST00000449094 HNRNPUL2Q1KMD3 747 aaKnown RBP18.67■□□□□ 0.58
PLXNB1-203ENST00000449094 CCDC88BA6NC98 1476 aa18.63■□□□□ 0.57
PLXNB1-203ENST00000449094 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
PLXNB1-203ENST00000449094 CENPBP07199 599 aaPredicted RBP18.58■□□□□ 0.56
PLXNB1-203ENST00000449094 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
PLXNB1-203ENST00000449094 ITGAEP38570 1179 aa18.54■□□□□ 0.56
PLXNB1-203ENST00000449094 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
PLXNB1-203ENST00000449094 WRNQ14191 1432 aaPredicted RBP eCLIP18.53■□□□□ 0.56
PLXNB1-203ENST00000449094 SMARCA4P51532 1647 aa18.5■□□□□ 0.55
PLXNB1-203ENST00000449094 SOGA1O94964 1423 aa18.49■□□□□ 0.55
PLXNB1-203ENST00000449094 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
PLXNB1-203ENST00000449094 DIEXFQ68CQ4 756 aaKnown RBP18.41■□□□□ 0.54
PLXNB1-203ENST00000449094 YTHDC1Q96MU7 727 aaKnown RBP18.4■□□□□ 0.54
PLXNB1-203ENST00000449094 CEP162Q5TB80 1403 aa18.39■□□□□ 0.53
PLXNB1-203ENST00000449094 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
PLXNB1-203ENST00000449094 P3H3Q8IVL6 736 aa18.36■□□□□ 0.53
PLXNB1-203ENST00000449094 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
PLXNB1-203ENST00000449094 GTF3C3Q9Y5Q9 886 aa18.34■□□□□ 0.53
PLXNB1-203ENST00000449094 EEA1Q15075 1411 aa18.33■□□□□ 0.52
PLXNB1-203ENST00000449094 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
PLXNB1-203ENST00000449094 NEUROD1Q13562 356 aa18.29■□□□□ 0.52
PLXNB1-203ENST00000449094 GOLGA3Q08378 1498 aa18.29■□□□□ 0.52
PLXNB1-203ENST00000449094 TNIKQ9UKE5 1360 aa18.28■□□□□ 0.52
PLXNB1-203ENST00000449094 CLIP1P30622 1438 aa18.28■□□□□ 0.52
PLXNB1-203ENST00000449094 RUSC2Q8N2Y8 1516 aa18.24■□□□□ 0.51
PLXNB1-203ENST00000449094 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
PLXNB1-203ENST00000449094 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
PLXNB1-203ENST00000449094 BICRAQ9NZM4 1560 aa18.16■□□□□ 0.5
PLXNB1-203ENST00000449094 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
PLXNB1-203ENST00000449094 MYT1Q01538 1121 aa18.09■□□□□ 0.49
PLXNB1-203ENST00000449094 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
PLXNB1-203ENST00000449094 ZNF316A6NFI3 1004 aaPredicted RBP18.07■□□□□ 0.48
PLXNB1-203ENST00000449094 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
PLXNB1-203ENST00000449094 FBLN2P98095 1184 aa18.05■□□□□ 0.48
PLXNB1-203ENST00000449094 CUX2O14529 1486 aa18■□□□□ 0.47
PLXNB1-203ENST00000449094 EIF4G1Q04637 1599 aaKnown RBP17.99■□□□□ 0.47
PLXNB1-203ENST00000449094 RAPGEF2Q9Y4G8 1499 aa17.98■□□□□ 0.47
PLXNB1-203ENST00000449094 CADPSQ9ULU8 1353 aa17.96■□□□□ 0.47
PLXNB1-203ENST00000449094 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
PLXNB1-203ENST00000449094 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
PLXNB1-203ENST00000449094 VPS8Q8N3P4 1428 aa17.9■□□□□ 0.46
PLXNB1-203ENST00000449094 SYNJ1O43426 1573 aa17.89■□□□□ 0.45
PLXNB1-203ENST00000449094 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
PLXNB1-203ENST00000449094 MIER1Q8N108 512 aa17.84■□□□□ 0.45
PLXNB1-203ENST00000449094 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
PLXNB1-203ENST00000449094 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
PLXNB1-203ENST00000449094 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
PLXNB1-203ENST00000449094 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
PLXNB1-203ENST00000449094 CFTRP13569 1480 aa17.74■□□□□ 0.43
PLXNB1-203ENST00000449094 MTUS2Q5JR59 1369 aa17.74■□□□□ 0.43
PLXNB1-203ENST00000449094 HMGXB3Q12766 1538 aa17.71■□□□□ 0.43
PLXNB1-203ENST00000449094 CHIC2Q9UKJ5 165 aa17.71■□□□□ 0.42
PLXNB1-203ENST00000449094 IGF1RP08069 1367 aa17.69■□□□□ 0.42
PLXNB1-203ENST00000449094 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
PLXNB1-203ENST00000449094 CHMP7Q8WUX9 453 aaPredicted RBP17.68■□□□□ 0.42
PLXNB1-203ENST00000449094 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
PLXNB1-203ENST00000449094 ZNF777Q9ULD5 760 aaPredicted RBP17.67■□□□□ 0.42
PLXNB1-203ENST00000449094 CNGB1Q14028 1251 aaPredicted RBP17.67■□□□□ 0.42
PLXNB1-203ENST00000449094 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
PLXNB1-203ENST00000449094 CUX1P39880 1505 aa17.65■□□□□ 0.42
PLXNB1-203ENST00000449094 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
PLXNB1-203ENST00000449094 RAD54L2Q9Y4B4 1467 aa17.65■□□□□ 0.42
PLXNB1-203ENST00000449094 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms