RNA–Protein interactions for RNA: ENST00000501740.6

ACSM3-203, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 5

Gene ACSM3, Length 839 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-203ENST00000501740 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
ACSM3-203ENST00000501740 ABCC9O60706 1549 aa32.26■■■□□ 2.76
ACSM3-203ENST00000501740 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
ACSM3-203ENST00000501740 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
ACSM3-203ENST00000501740 DNAJC5BQ9UF47 199 aa30.37■■■□□ 2.45
ACSM3-203ENST00000501740 NACADO15069 1562 aa30.32■■■□□ 2.45
ACSM3-203ENST00000501740 DCAF8L2P0C7V8 631 aa30.12■■■□□ 2.41
ACSM3-203ENST00000501740 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
ACSM3-203ENST00000501740 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
ACSM3-203ENST00000501740 MYO15BQ96JP2 1530 aa29.83■■■□□ 2.37
ACSM3-203ENST00000501740 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
ACSM3-203ENST00000501740 ZCCHC6Q5VYS8 1495 aaKnown RBP29.62■■■□□ 2.33
ACSM3-203ENST00000501740 DCAF1Q9Y4B6 1507 aa29.45■■■□□ 2.3
ACSM3-203ENST00000501740 SCRIBQ14160 1630 aa29.34■■■□□ 2.29
ACSM3-203ENST00000501740 SHROOM4Q9ULL8 1493 aa29.22■■■□□ 2.27
ACSM3-203ENST00000501740 CC2D2AQ9P2K1 1620 aa29.14■■■□□ 2.26
ACSM3-203ENST00000501740 EIF4G1Q04637 1599 aaKnown RBP29.04■■■□□ 2.24
ACSM3-203ENST00000501740 CECR2Q9BXF3 1484 aa29.03■■■□□ 2.24
ACSM3-203ENST00000501740 NCAPD3P42695 1498 aa28■■■□□ 2.07
ACSM3-203ENST00000501740 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.06
ACSM3-203ENST00000501740 SMARCA4P51532 1647 aa27.93■■■□□ 2.06
ACSM3-203ENST00000501740 DNAJC5Q9H3Z4 198 aa27.83■■■□□ 2.05
ACSM3-203ENST00000501740 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
ACSM3-203ENST00000501740 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
ACSM3-203ENST00000501740 ERCC6Q03468 1493 aa27.79■■■□□ 2.04
ACSM3-203ENST00000501740 CUX2O14529 1486 aa27.76■■■□□ 2.03
ACSM3-203ENST00000501740 NESP48681 1621 aa27.73■■■□□ 2.03
ACSM3-203ENST00000501740 BAZ1AQ9NRL2 1556 aaPredicted RBP27.7■■■□□ 2.03
ACSM3-203ENST00000501740 BAZ1BQ9UIG0 1483 aaKnown RBP27.66■■■□□ 2.02
ACSM3-203ENST00000501740 PEG3Q9GZU2 1588 aa27.61■■■□□ 2.01
ACSM3-203ENST00000501740 MROH2BQ7Z745 1585 aa27.59■■■□□ 2.01
ACSM3-203ENST00000501740 THOC2Q8NI27 1593 aaKnown RBP27.48■■□□□ 1.99
ACSM3-203ENST00000501740 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.98
ACSM3-203ENST00000501740 KIF21AQ7Z4S6 1674 aa27.38■■□□□ 1.97
ACSM3-203ENST00000501740 WIZO95785 1651 aa27.27■■□□□ 1.96
ACSM3-203ENST00000501740 PDS5BQ9NTI5 1447 aa27.18■■□□□ 1.94
ACSM3-203ENST00000501740 CADPSQ9ULU8 1353 aa27.13■■□□□ 1.93
ACSM3-203ENST00000501740 MRC2Q9UBG0 1479 aa27.05■■□□□ 1.92
ACSM3-203ENST00000501740 WDR62O43379 1518 aa27.01■■□□□ 1.91
ACSM3-203ENST00000501740 RSF1Q96T23 1441 aaPredicted RBP26.92■■□□□ 1.9
ACSM3-203ENST00000501740 CEP164Q9UPV0 1460 aa26.91■■□□□ 1.9
ACSM3-203ENST00000501740 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
ACSM3-203ENST00000501740 TOP2AP11388 1531 aaKnown RBP26.86■■□□□ 1.89
ACSM3-203ENST00000501740 CFTRP13569 1480 aa26.83■■□□□ 1.89
ACSM3-203ENST00000501740 URB2Q14146 1524 aaKnown RBP26.72■■□□□ 1.87
ACSM3-203ENST00000501740 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
ACSM3-203ENST00000501740 PRDM2Q13029 1718 aa26.63■■□□□ 1.85
ACSM3-203ENST00000501740 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
ACSM3-203ENST00000501740 ZNF608Q9ULD9 1512 aaPredicted RBP26.43■■□□□ 1.82
ACSM3-203ENST00000501740 OSCARQ8IYS5 282 aa26.39■■□□□ 1.82
ACSM3-203ENST00000501740 TOPBP1Q92547 1522 aa26.38■■□□□ 1.81
ACSM3-203ENST00000501740 IFT140Q96RY7 1462 aa26.35■■□□□ 1.81
ACSM3-203ENST00000501740 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
ACSM3-203ENST00000501740 DNMBPQ6XZF7 1577 aa26.26■■□□□ 1.79
ACSM3-203ENST00000501740 RIMBP3CA6NJZ7 1639 aa26.25■■□□□ 1.79
ACSM3-203ENST00000501740 RIMBP3BA6NNM3 1639 aa26.25■■□□□ 1.79
ACSM3-203ENST00000501740 RIMBP3Q9UFD9 1639 aa26.25■■□□□ 1.79
ACSM3-203ENST00000501740 TARBP1Q13395 1621 aaKnown RBP26.19■■□□□ 1.78
ACSM3-203ENST00000501740 ABCC8Q09428 1581 aa26.17■■□□□ 1.78
ACSM3-203ENST00000501740 AQRO60306 1485 aaKnown RBP eCLIP26.12■■□□□ 1.77
ACSM3-203ENST00000501740 CHD1O14646 1710 aa26.12■■□□□ 1.77
ACSM3-203ENST00000501740 ARHGEF11O15085 1522 aa26.12■■□□□ 1.77
ACSM3-203ENST00000501740 POLA1P09884 1462 aaPredicted RBP26.11■■□□□ 1.77
ACSM3-203ENST00000501740 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
ACSM3-203ENST00000501740 FGD5Q6ZNL6 1462 aa25.93■■□□□ 1.74
ACSM3-203ENST00000501740 TDRD9Q8NDG6 1382 aaKnown RBP25.93■■□□□ 1.74
ACSM3-203ENST00000501740 CUX1P39880 1505 aa25.93■■□□□ 1.74
ACSM3-203ENST00000501740 SOGA1O94964 1423 aa25.91■■□□□ 1.74
ACSM3-203ENST00000501740 FBLN2P98095 1184 aa25.89■■□□□ 1.74
ACSM3-203ENST00000501740 ARAP1Q96P48 1450 aa25.89■■□□□ 1.73
ACSM3-203ENST00000501740 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
ACSM3-203ENST00000501740 CYB5RLQ6IPT4 315 aa25.85■■□□□ 1.73
ACSM3-203ENST00000501740 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
ACSM3-203ENST00000501740 CLASP1Q7Z460 1538 aa25.78■■□□□ 1.72
ACSM3-203ENST00000501740 MAGI1Q96QZ7 1491 aaPredicted RBP25.72■■□□□ 1.71
ACSM3-203ENST00000501740 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
ACSM3-203ENST00000501740 GRIN2BQ13224 1484 aa25.71■■□□□ 1.71
ACSM3-203ENST00000501740 SYNJ1O43426 1573 aa25.68■■□□□ 1.7
ACSM3-203ENST00000501740 SYNJ2O15056 1496 aa25.66■■□□□ 1.7
ACSM3-203ENST00000501740 CHMP7Q8WUX9 453 aaPredicted RBP25.64■■□□□ 1.7
ACSM3-203ENST00000501740 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
ACSM3-203ENST00000501740 GAPVD1Q14C86 1478 aa25.62■■□□□ 1.69
ACSM3-203ENST00000501740 SUPT5HO00267 1087 aaKnown RBP25.61■■□□□ 1.69
ACSM3-203ENST00000501740 ABCA10Q8WWZ4 1543 aa25.59■■□□□ 1.69
ACSM3-203ENST00000501740 TRHP20396 242 aaPredicted RBP25.57■■□□□ 1.68
ACSM3-203ENST00000501740 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
ACSM3-203ENST00000501740 ADAMTS12P58397 1594 aa25.46■■□□□ 1.67
ACSM3-203ENST00000501740 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
ACSM3-203ENST00000501740 TOP2BQ02880 1626 aa25.44■■□□□ 1.66
ACSM3-203ENST00000501740 GRIN2AQ12879 1464 aa25.42■■□□□ 1.66
ACSM3-203ENST00000501740 WRNQ14191 1432 aaPredicted RBP eCLIP25.42■■□□□ 1.66
ACSM3-203ENST00000501740 CEP170Q5SW79 1584 aa25.41■■□□□ 1.66
ACSM3-203ENST00000501740 NUP160Q12769 1436 aa25.34■■□□□ 1.65
ACSM3-203ENST00000501740 SHROOM2Q13796 1616 aa25.27■■□□□ 1.64
ACSM3-203ENST00000501740 FHAD1B1AJZ9 1412 aa25.27■■□□□ 1.64
ACSM3-203ENST00000501740 ERICH3Q5RHP9 1530 aa25.25■■□□□ 1.63
ACSM3-203ENST00000501740 RUSC2Q8N2Y8 1516 aa25.11■■□□□ 1.61
ACSM3-203ENST00000501740 PRG4Q92954 1404 aaPredicted RBP25.08■■□□□ 1.61
ACSM3-203ENST00000501740 KIF13AQ9H1H9 1805 aa25.04■■□□□ 1.6
ACSM3-203ENST00000501740 JPH4Q96JJ6 628 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms