RNA–Protein interactions for RNA: ENST00000546652.6

PCBP2-208, Transcript of poly(rC) binding protein 2, humanhuman

TSL 5

Gene PCBP2, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-208ENST00000546652 NISCHQ9Y2I1 1504 aa28.12■■■□□ 2.09
PCBP2-208ENST00000546652 CCDC180Q9P1Z9 1646 aa25.05■■□□□ 1.6
PCBP2-208ENST00000546652 ABCC9O60706 1549 aa25.02■■□□□ 1.6
PCBP2-208ENST00000546652 DCAF8L2P0C7V8 631 aa23.91■■□□□ 1.42
PCBP2-208ENST00000546652 RB1CC1Q8TDY2 1594 aa23.83■■□□□ 1.41
PCBP2-208ENST00000546652 NACADO15069 1562 aa23.7■■□□□ 1.38
PCBP2-208ENST00000546652 PABPN1Q86U42 306 aaKnown RBP eCLIP23.41■■□□□ 1.34
PCBP2-208ENST00000546652 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
PCBP2-208ENST00000546652 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
PCBP2-208ENST00000546652 DNAJC5BQ9UF47 199 aa23.29■■□□□ 1.32
PCBP2-208ENST00000546652 UNC13AQ9UPW8 1703 aa23.18■■□□□ 1.3
PCBP2-208ENST00000546652 DCAF1Q9Y4B6 1507 aa23.17■■□□□ 1.3
PCBP2-208ENST00000546652 BICRAQ9NZM4 1560 aa23.07■■□□□ 1.28
PCBP2-208ENST00000546652 SCRIBQ14160 1630 aa22.96■■□□□ 1.27
PCBP2-208ENST00000546652 SHROOM4Q9ULL8 1493 aa22.77■■□□□ 1.24
PCBP2-208ENST00000546652 EIF4G1Q04637 1599 aaKnown RBP22.54■■□□□ 1.2
PCBP2-208ENST00000546652 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
PCBP2-208ENST00000546652 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
PCBP2-208ENST00000546652 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
PCBP2-208ENST00000546652 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
PCBP2-208ENST00000546652 SMARCA4P51532 1647 aa21.87■■□□□ 1.09
PCBP2-208ENST00000546652 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
PCBP2-208ENST00000546652 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
PCBP2-208ENST00000546652 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
PCBP2-208ENST00000546652 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
PCBP2-208ENST00000546652 MROH2BQ7Z745 1585 aa21.68■■□□□ 1.06
PCBP2-208ENST00000546652 ERCC6Q03468 1493 aa21.63■■□□□ 1.05
PCBP2-208ENST00000546652 PEG3Q9GZU2 1588 aa21.6■■□□□ 1.05
PCBP2-208ENST00000546652 NESP48681 1621 aa21.53■■□□□ 1.04
PCBP2-208ENST00000546652 WIZO95785 1651 aa21.42■■□□□ 1.02
PCBP2-208ENST00000546652 CUX2O14529 1486 aa21.41■■□□□ 1.02
PCBP2-208ENST00000546652 LAMC3Q9Y6N6 1575 aa21.35■■□□□ 1.01
PCBP2-208ENST00000546652 RSF1Q96T23 1441 aaPredicted RBP21.33■■□□□ 1.01
PCBP2-208ENST00000546652 PDS5BQ9NTI5 1447 aa21.3■■□□□ 1
PCBP2-208ENST00000546652 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
PCBP2-208ENST00000546652 DNAJC5Q9H3Z4 198 aa21.24■□□□□ 0.99
PCBP2-208ENST00000546652 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
PCBP2-208ENST00000546652 THOC2Q8NI27 1593 aaKnown RBP21.17■□□□□ 0.98
PCBP2-208ENST00000546652 TOP2AP11388 1531 aaKnown RBP21.15■□□□□ 0.98
PCBP2-208ENST00000546652 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
PCBP2-208ENST00000546652 CFTRP13569 1480 aa21.05■□□□□ 0.96
PCBP2-208ENST00000546652 FANCD2Q9BXW9 1451 aa21.04■□□□□ 0.96
PCBP2-208ENST00000546652 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
PCBP2-208ENST00000546652 CCDC88BA6NC98 1476 aa20.96■□□□□ 0.95
PCBP2-208ENST00000546652 WDR62O43379 1518 aa20.96■□□□□ 0.95
PCBP2-208ENST00000546652 URB2Q14146 1524 aaKnown RBP20.83■□□□□ 0.92
PCBP2-208ENST00000546652 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
PCBP2-208ENST00000546652 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
PCBP2-208ENST00000546652 TOPBP1Q92547 1522 aa20.64■□□□□ 0.9
PCBP2-208ENST00000546652 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
PCBP2-208ENST00000546652 IFT140Q96RY7 1462 aa20.61■□□□□ 0.89
PCBP2-208ENST00000546652 OSCARQ8IYS5 282 aa20.6■□□□□ 0.89
PCBP2-208ENST00000546652 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
PCBP2-208ENST00000546652 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
PCBP2-208ENST00000546652 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
PCBP2-208ENST00000546652 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
PCBP2-208ENST00000546652 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.864e-7■■■■□ 22.4
PCBP2-208ENST00000546652 SOGA1O94964 1423 aa20.43■□□□□ 0.86
PCBP2-208ENST00000546652 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
PCBP2-208ENST00000546652 EIF4G3O43432 1585 aaKnown RBP20.4■□□□□ 0.86
PCBP2-208ENST00000546652 FBLN2P98095 1184 aa20.4■□□□□ 0.86
PCBP2-208ENST00000546652 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
PCBP2-208ENST00000546652 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
PCBP2-208ENST00000546652 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
PCBP2-208ENST00000546652 CUX1P39880 1505 aa20.35■□□□□ 0.85
PCBP2-208ENST00000546652 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
PCBP2-208ENST00000546652 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
PCBP2-208ENST00000546652 CHD1O14646 1710 aa20.19■□□□□ 0.82
PCBP2-208ENST00000546652 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
PCBP2-208ENST00000546652 RIMBP3CA6NJZ7 1639 aa20.17■□□□□ 0.82
PCBP2-208ENST00000546652 RIMBP3BA6NNM3 1639 aa20.17■□□□□ 0.82
PCBP2-208ENST00000546652 RIMBP3Q9UFD9 1639 aa20.17■□□□□ 0.82
PCBP2-208ENST00000546652 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
PCBP2-208ENST00000546652 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
PCBP2-208ENST00000546652 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
PCBP2-208ENST00000546652 GAPVD1Q14C86 1478 aa20.15■□□□□ 0.82
PCBP2-208ENST00000546652 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
PCBP2-208ENST00000546652 CYB5RLQ6IPT4 315 aa20.13■□□□□ 0.81
PCBP2-208ENST00000546652 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
PCBP2-208ENST00000546652 SYNJ2O15056 1496 aa20.08■□□□□ 0.81
PCBP2-208ENST00000546652 TOP2BQ02880 1626 aa20.05■□□□□ 0.8
PCBP2-208ENST00000546652 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
PCBP2-208ENST00000546652 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
PCBP2-208ENST00000546652 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.8
PCBP2-208ENST00000546652 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.79
PCBP2-208ENST00000546652 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
PCBP2-208ENST00000546652 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
PCBP2-208ENST00000546652 GRIN2AQ12879 1464 aa19.91■□□□□ 0.78
PCBP2-208ENST00000546652 TRHP20396 242 aaPredicted RBP19.9■□□□□ 0.78
PCBP2-208ENST00000546652 FHAD1B1AJZ9 1412 aa19.9■□□□□ 0.78
PCBP2-208ENST00000546652 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
PCBP2-208ENST00000546652 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
PCBP2-208ENST00000546652 NUP160Q12769 1436 aa19.8■□□□□ 0.76
PCBP2-208ENST00000546652 CEP170Q5SW79 1584 aa19.79■□□□□ 0.76
PCBP2-208ENST00000546652 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
PCBP2-208ENST00000546652 IGF1RP08069 1367 aa19.72■□□□□ 0.75
PCBP2-208ENST00000546652 ERCC6L2Q5T890 1561 aa19.72■□□□□ 0.75
PCBP2-208ENST00000546652 JPH4Q96JJ6 628 aa19.72■□□□□ 0.75
PCBP2-208ENST00000546652 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
PCBP2-208ENST00000546652 SHROOM2Q13796 1616 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms