Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 TNFRSF10B-207ENST00000523504 1464 ntTSL 220.05■□□□□ 0.84e-9■■□□□ 12
DDX59Q5T1V6 TNFRSF10B-201ENST00000276431 4146 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.594e-9■■□□□ 12
DDX59Q5T1V6 ANO9-208ENST00000534161 2158 ntTSL 216.19■□□□□ 0.185e-11■■□□□ 12
DDX59Q5T1V6 ANO9-204ENST00000525857 466 ntTSL 413.87□□□□□ -0.195e-11■■□□□ 12
DDX59Q5T1V6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.71□□□□□ -0.224e-7■■□□□ 12
DDX59Q5T1V6 PCBP2-204ENST00000439930 1296 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.824e-16■■□□□ 12
DDX59Q5T1V6 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC8.37□□□□□ -1.074e-16■■□□□ 12
DDX59Q5T1V6 WNK2-211ENST00000464625 557 ntTSL 410.83□□□□□ -0.682e-7■■□□□ 12
DDX59Q5T1V6 CHRD-207ENST00000459711 503 ntTSL 217.43■□□□□ 0.383e-8■■□□□ 12
DDX59Q5T1V6 STAU1-208ENST00000437404 1085 ntTSL 1 (best)18.39■□□□□ 0.533e-7■■□□□ 12
DDX59Q5T1V6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.53e-7■■□□□ 12
DDX59Q5T1V6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.97■□□□□ 0.153e-7■■□□□ 12
DDX59Q5T1V6 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.27□□□□□ -0.293e-7■■□□□ 12
DDX59Q5T1V6 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.343e-7■■□□□ 12
DDX59Q5T1V6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.343e-7■■□□□ 12
DDX59Q5T1V6 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.453e-7■■□□□ 12
DDX59Q5T1V6 PSME1-208ENST00000561059 947 ntTSL 211.94□□□□□ -0.53e-7■■□□□ 12
DDX59Q5T1V6 PSME1-209ENST00000561142 865 ntTSL 511.94□□□□□ -0.53e-7■■□□□ 12
DDX59Q5T1V6 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.53e-7■■□□□ 12
DDX59Q5T1V6 STAU1-203ENST00000360426 3211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.583e-7■■□□□ 12
DDX59Q5T1V6 STAU1-202ENST00000347458 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.633e-7■■□□□ 12
DDX59Q5T1V6 STAU1-204ENST00000371792 3130 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.633e-7■■□□□ 12
DDX59Q5T1V6 STAU1-205ENST00000371802 3154 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.73e-7■■□□□ 12
DDX59Q5T1V6 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.713e-7■■□□□ 12
DDX59Q5T1V6 STAU1-201ENST00000340954 3334 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.783e-7■■□□□ 12
DDX59Q5T1V6 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.823e-7■■□□□ 12
DDX59Q5T1V6 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.823e-7■■□□□ 12
DDX59Q5T1V6 PSME1-210ENST00000561435 945 ntTSL 2 BASIC9.87□□□□□ -0.833e-7■■□□□ 12
DDX59Q5T1V6 ATP2A1-205ENST00000563975 545 ntTSL 29.71□□□□□ -0.863e-7■■□□□ 12
DDX59Q5T1V6 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.073e-7■■□□□ 12
DDX59Q5T1V6 SYNJ2-203ENST00000367113 939 ntTSL 27.19□□□□□ -1.263e-7■■□□□ 12
DDX59Q5T1V6 ATP2A1-204ENST00000562185 576 ntTSL 26.38□□□□□ -1.393e-7■■□□□ 12
DDX59Q5T1V6 PSME1-203ENST00000470718 476 ntTSL 33.06□□□□□ -1.923e-7■■□□□ 12
DDX59Q5T1V6 LAMA5-205ENST00000464134 637 ntTSL 211.81□□□□□ -0.523e-12■■□□□ 11.9
DDX59Q5T1V6 PSME2-216ENST00000561103 460 ntTSL 310.37□□□□□ -0.754e-16■■□□□ 11.9
DDX59Q5T1V6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.093e-9■■□□□ 11.9
DDX59Q5T1V6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.953e-9■■□□□ 11.9
DDX59Q5T1V6 ZNF444-204ENST00000587236 5565 ntTSL 215.69■□□□□ 0.13e-9■■□□□ 11.9
DDX59Q5T1V6 SLC9A1-201ENST00000263980 4516 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.753e-10■■□□□ 11.9
DDX59Q5T1V6 INTS11-234ENST00000527383 668 ntTSL 313.72□□□□□ -0.212e-6■■□□□ 11.9
DDX59Q5T1V6 RTEL1-202ENST00000356810 1339 ntTSL 1 (best)13.56□□□□□ -0.242e-6■■□□□ 11.9
DDX59Q5T1V6 RTEL1-207ENST00000463361 575 ntTSL 412.48□□□□□ -0.412e-6■■□□□ 11.9
DDX59Q5T1V6 INTS11-213ENST00000467408 639 ntTSL 210.92□□□□□ -0.662e-6■■□□□ 11.9
DDX59Q5T1V6 RCOR3-205ENST00000472734 452 ntTSL 219.71■□□□□ 0.752e-8■■□□□ 11.9
DDX59Q5T1V6 SEMA4G-201ENST00000210633 4094 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.822e-26■■□□□ 11.9
DDX59Q5T1V6 CLASRP-215ENST00000592056 582 ntTSL 217.27■□□□□ 0.364e-9■■□□□ 11.8
DDX59Q5T1V6 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.34□□□□□ -0.274e-9■■□□□ 11.8
DDX59Q5T1V6 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.444e-9■■□□□ 11.8
DDX59Q5T1V6 CLASRP-212ENST00000588936 590 ntTSL 49.2□□□□□ -0.944e-9■■□□□ 11.8
DDX59Q5T1V6 CARHSP1-215ENST00000570125 681 ntTSL 425.63■■□□□ 1.696e-6■■□□□ 11.8
DDX59Q5T1V6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.376e-6■■□□□ 11.8
DDX59Q5T1V6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.186e-6■■□□□ 11.8
DDX59Q5T1V6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.26■■□□□ 1.156e-6■■□□□ 11.8
DDX59Q5T1V6 PXN-217ENST00000550795 513 ntTSL 321.94■■□□□ 1.16e-6■■□□□ 11.8
DDX59Q5T1V6 TBL1X-205ENST00000422314 496 ntTSL 221.55■■□□□ 1.046e-6■■□□□ 11.8
DDX59Q5T1V6 PXN-220ENST00000637386 621 ntTSL 519.61■□□□□ 0.736e-6■■□□□ 11.8
DDX59Q5T1V6 BSCL2-211ENST00000448568 992 ntAPPRIS ALT2 TSL 319.37■□□□□ 0.696e-6■■□□□ 11.8
DDX59Q5T1V6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.69■□□□□ 0.586e-6■■□□□ 11.8
DDX59Q5T1V6 CARHSP1-206ENST00000563815 1913 ntTSL 218.61■□□□□ 0.576e-6■■□□□ 11.8
DDX59Q5T1V6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.546e-6■■□□□ 11.8
DDX59Q5T1V6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.526e-6■■□□□ 11.8
DDX59Q5T1V6 AKAP17A-203ENST00000474361 3232 ntTSL 1 (best)18.01■□□□□ 0.476e-6■■□□□ 11.8
DDX59Q5T1V6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.476e-6■■□□□ 11.8
DDX59Q5T1V6 FGFR4-213ENST00000511076 838 ntTSL 517.79■□□□□ 0.446e-6■■□□□ 11.8
DDX59Q5T1V6 INF2-205ENST00000474229 947 ntTSL 317.73■□□□□ 0.436e-6■■□□□ 11.8
DDX59Q5T1V6 PXN-203ENST00000323871 5457 ntTSL 217.46■□□□□ 0.396e-6■■□□□ 11.8
DDX59Q5T1V6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.42■□□□□ 0.386e-6■■□□□ 11.8
DDX59Q5T1V6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.376e-6■■□□□ 11.8
DDX59Q5T1V6 AC012317.2-201ENST00000623305 2251 ntBASIC17.16■□□□□ 0.346e-6■■□□□ 11.8
DDX59Q5T1V6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.336e-6■■□□□ 11.8
DDX59Q5T1V6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.36e-6■■□□□ 11.8
DDX59Q5T1V6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.286e-6■■□□□ 11.8
DDX59Q5T1V6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.276e-6■■□□□ 11.8
DDX59Q5T1V6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.256e-6■■□□□ 11.8
DDX59Q5T1V6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.242e-6■■□□□ 11.8
DDX59Q5T1V6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.226e-6■■□□□ 11.8
DDX59Q5T1V6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.26e-6■■□□□ 11.8
DDX59Q5T1V6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.196e-6■■□□□ 11.8
DDX59Q5T1V6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.156e-6■■□□□ 11.8
DDX59Q5T1V6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.146e-6■■□□□ 11.8
DDX59Q5T1V6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.116e-6■■□□□ 11.8
DDX59Q5T1V6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.63■□□□□ 0.096e-6■■□□□ 11.8
DDX59Q5T1V6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.086e-6■■□□□ 11.8
DDX59Q5T1V6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.076e-6■■□□□ 11.8
DDX59Q5T1V6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.046e-6■■□□□ 11.8
DDX59Q5T1V6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.026e-6■■□□□ 11.8
DDX59Q5T1V6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.016e-6■■□□□ 11.8
DDX59Q5T1V6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 06e-6■■□□□ 11.8
DDX59Q5T1V6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.036e-6■■□□□ 11.8
DDX59Q5T1V6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.85□□□□□ -0.036e-6■■□□□ 11.8
DDX59Q5T1V6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.046e-6■■□□□ 11.8
DDX59Q5T1V6 SUGP2-211ENST00000598240 3235 ntTSL 214.8□□□□□ -0.046e-6■■□□□ 11.8
DDX59Q5T1V6 LMNA-219ENST00000502751 570 ntTSL 414.79□□□□□ -0.046e-6■■□□□ 11.8
DDX59Q5T1V6 ELMO3-204ENST00000571587 780 ntTSL 514.76□□□□□ -0.056e-6■■□□□ 11.8
DDX59Q5T1V6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.086e-6■■□□□ 11.8
DDX59Q5T1V6 ANKRD11-213ENST00000567736 2750 ntTSL 214.51□□□□□ -0.096e-6■■□□□ 11.8
DDX59Q5T1V6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.16e-6■■□□□ 11.8
DDX59Q5T1V6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.16e-6■■□□□ 11.8
DDX59Q5T1V6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.16e-6■■□□□ 11.8
DDX59Q5T1V6 CARHSP1-204ENST00000562586 578 ntTSL 214.33□□□□□ -0.126e-6■■□□□ 11.8
Retrieved 100 of 7,289 protein–RNA pairs in 179.8 ms